RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
CAPN3-204ENST00000356316 TLR7Q9NYK1 1049 aaKnown RBP12.98□□□□□ -0.33
CAPN3-204ENST00000356316 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
CAPN3-204ENST00000356316 GABRQQ9UN88 632 aa12.98□□□□□ -0.33
CAPN3-204ENST00000356316 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 HMMRO75330 724 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
CAPN3-204ENST00000356316 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-204ENST00000356316 FAM110CQ1W6H9 321 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-204ENST00000356316 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
CAPN3-204ENST00000356316 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-204ENST00000356316 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 DPF3Q92784 378 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
CAPN3-204ENST00000356316 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 USP17L10C9JJH3 530 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 CAPN2P17655 700 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 GJA8P48165 433 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 BACE1P56817 501 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-204ENST00000356316 IRF5Q13568 498 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 MTMR2Q13614 643 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
CAPN3-204ENST00000356316 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 CCAR1Q8IX12 1150 aaKnown RBP12.96□□□□□ -0.33
CAPN3-204ENST00000356316 MIGA1Q8NAN2 632 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-204ENST00000356316 IL1RAPL2Q9NP60 686 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
CAPN3-204ENST00000356316 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 APBB1O00213 710 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 GDF11O95390 407 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
CAPN3-204ENST00000356316 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
CAPN3-204ENST00000356316 ELNP15502 786 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 METTL16Q86W50 562 aaKnown RBP12.95□□□□□ -0.34
CAPN3-204ENST00000356316 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
CAPN3-204ENST00000356316 MYH1P12882 1939 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 SGPL1O95470 568 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 INHAP05111 366 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 HOXA7P31268 230 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-204ENST00000356316 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
CAPN3-204ENST00000356316 UNC93B1Q9H1C4 597 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 SERPINB13Q9UIV8 391 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 ZBTB21Q9ULJ3 1066 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
CAPN3-204ENST00000356316 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 POLR3DP05423 398 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-204ENST00000356316 HABP4Q5JVS0 413 aaKnown RBP12.93□□□□□ -0.34
CAPN3-204ENST00000356316 SLC9C2Q5TAH2 1124 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
CAPN3-204ENST00000356316 FEZ1Q99689 392 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
CAPN3-204ENST00000356316 H0YGN5 161 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 GH2P01242 217 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-204ENST00000356316 TATDN1Q6P1N9 297 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
CAPN3-204ENST00000356316 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
CAPN3-204ENST00000356316 EHD4Q9H223 541 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
CAPN3-204ENST00000356316 ZBTB40Q9NUA8 1239 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 MORF4L1Q9UBU8 362 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
CAPN3-204ENST00000356316 GOLIM4O00461 696 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-204ENST00000356316 USP14P54578 494 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 HERVK_113P62684 666 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 JAG1P78504 1218 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 PDE3AQ14432 1141 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 ABCB5Q2M3G0 1257 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN3-204ENST00000356316 GTF3C2Q8WUA4 911 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-204ENST00000356316 NR2E3Q9Y5X4 410 aa12.91□□□□□ -0.34
CAPN3-204ENST00000356316 DOCK3Q8IZD9 2030 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L15C9J2P7 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L13C9JLJ4 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L11C9JVI0 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L18D6R9N7 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L22D6RA61 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L17D6RBQ6 530 aa12.9□□□□□ -0.34
CAPN3-204ENST00000356316 USP17L19D6RCP7 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms