RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 FAM83AQ86UY5 434 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 ZNF384Q8TF68 577 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 NLRP7Q8WX94 980 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 TDRD3Q9H7E2 651 aaKnown RBP4.81□□□□□ -1.64
CNOT4-202ENST00000356162 STAP2Q9UGK3 403 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 SIPA1L1O43166 1804 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 CNTNAP1P78357 1384 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 GOLIM4O00461 696 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 IDH1O75874 414 aaKnown RBP4.81□□□□□ -1.64
CNOT4-202ENST00000356162 CDC42EP5Q6NZY7 148 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 CHD1LQ86WJ1 897 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 PI4K2BQ8TCG2 481 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 HOOK2Q96ED9 719 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 HHIPL1Q96JK4 782 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 IDI2Q9BXS1 227 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.81□□□□□ -1.64
CNOT4-202ENST00000356162 BOLA2Q9H3K6 86 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 GBA2Q9HCG7 927 aaPredicted RBP4.81□□□□□ -1.64
CNOT4-202ENST00000356162 TLL2Q9Y6L7 1015 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 MYH1P12882 1939 aa4.81□□□□□ -1.64
CNOT4-202ENST00000356162 DOCK1Q14185 1865 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 RASSF10A6NK89 507 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ENTPD3O75355 529 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 BAG3O95817 575 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 PDE6AP16499 860 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 CYP7A1P22680 504 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 RHBDL3P58872 404 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 LRRFIP1Q32MZ4 808 aaKnown RBP4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ERICH6BQ5W0A0 696 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ZSCAN25Q6NSZ9 544 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 OTUD7AQ8TE49 926 aaPredicted RBP4.8□□□□□ -1.64
CNOT4-202ENST00000356162 LNPKQ9C0E8 428 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 DEFB129Q9H1M3 183 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ANTXR1Q9H6X2 564 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 USP40Q9NVE5 1235 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ATRNL1Q5VV63 1379 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 TCP10L2B9ZVM9 353 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ADD2P35612 726 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 PDE1AP54750 535 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 RASA3Q14644 834 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 MAP3K11Q16584 847 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 SUPT20HL1Q3ZLR7 823 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 CENPQQ7L2Z9 268 aaPredicted RBP4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ARMC9Q7Z3E5 817 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 TICAM2Q86XR7 235 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 TEX11Q8IYF3 940 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 KBTBD3Q8NAB2 608 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 FAM151AQ8WW52 585 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 OSBPL3Q9H4L5 887 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ZNF408Q9H9D4 720 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.8□□□□□ -1.64
CNOT4-202ENST00000356162 NDUFB9Q9Y6M9 179 aa4.8□□□□□ -1.64
CNOT4-202ENST00000356162 ATAD5Q96QE3 1844 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 TCRBV5S4A2TA0A5A2 114 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 UNCXA6NJT0 531 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 IRF6O14896 467 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 WDHD1O75717 1129 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 ZFYP08048 801 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 RGS3P49796 1198 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 FMR1Q06787 632 aaKnown RBP eCLIP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 UBE3CQ15386 1083 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 CST9Q5W186 159 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 TSHZ3Q63HK5 1081 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 DCAF15Q66K64 600 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 EDC3Q96F86 508 aaKnown RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 TEPSINQ96N21 525 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 BCL11AQ9H165 835 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 UTRNP46939 3433 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 ZNF532Q9HCE3 1301 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 DDX11L8A8MPP1 907 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 ECE1P42892 770 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 CACNB3P54284 484 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 NFIAQ12857 509 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 SLC9C2Q5TAH2 1124 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 B4GALNT3Q6L9W6 998 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 ADGRA1Q86SQ6 560 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 PLEKHM2Q8IWE5 1019 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 SH3RF3Q8TEJ3 882 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 KLRG1Q96E93 195 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
CNOT4-202ENST00000356162 OSBPL5Q9H0X9 879 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 AATFQ9NY61 560 aaKnown RBP eCLIP4.79□□□□□ -1.64
CNOT4-202ENST00000356162 MYH8P13535 1937 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 LAMA4Q16363 1823 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 FLT1P17948 1338 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 MAGEB6P1A0A0J9YX57 407 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 TLL1O43897 1013 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 PPP1R12BO60237 982 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 IREB2P48200 963 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 HUNKP57058 714 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 DYNLL1P63167 89 aaKnown RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 TTLL12Q14166 644 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 NBPF12Q5TAG4 269 aaPredicted RBP4.78□□□□□ -1.64
CNOT4-202ENST00000356162 DLK2Q6UY11 383 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 SAPCD2Q86UD0 394 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 RDH13Q8NBN7 331 aa4.78□□□□□ -1.64
CNOT4-202ENST00000356162 APPBP2Q92624 585 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms