RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MAGEB6P1A0A0J9YX57 407 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 OSBPP22059 807 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 TTF1Q15361 905 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 SH3D19Q5HYK7 790 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 ZNF333Q96JL9 665 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 GABRQQ9UN88 632 aa20.31■□□□□ 0.84
PDLIM7-201ENST00000355572 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-201ENST00000355572 MTMR2Q13614 643 aa20.3■□□□□ 0.84
PDLIM7-201ENST00000355572 TATDN1Q6P1N9 297 aa20.3■□□□□ 0.84
PDLIM7-201ENST00000355572 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-201ENST00000355572 SLC45A1Q9Y2W3 748 aa20.3■□□□□ 0.84
PDLIM7-201ENST00000355572 SHMT1P34896 483 aa20.29■□□□□ 0.84
PDLIM7-201ENST00000355572 GABPAQ06546 454 aa20.29■□□□□ 0.84
PDLIM7-201ENST00000355572 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
PDLIM7-201ENST00000355572 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
PDLIM7-201ENST00000355572 RLFQ13129 1914 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 GH2P01242 217 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 HLA-DOAP06340 250 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 PROCA1Q8NCQ7 364 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 SLC44A5Q8NCS7 719 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 DCP1AQ9NPI6 582 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 SRRDQ9UH36 339 aa20.28■□□□□ 0.84
PDLIM7-201ENST00000355572 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 CYP2D7A0A087X1C5 515 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 MBD4O95243 580 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 ASNSP08243 561 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 EN2P19622 333 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 PRKCZQ05513 592 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 ANKRD13CQ8N6S4 541 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 EHD4Q9H223 541 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 SERPINB13Q9UIV8 391 aa20.27■□□□□ 0.84
PDLIM7-201ENST00000355572 PDE4DIPQ5VU43 2346 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 FMNL1O95466 1100 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 BACE1P56817 501 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 KIF22Q14807 665 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 MTFR1Q15390 333 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 SLC9C1Q4G0N8 1177 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 MYPNQ86TC9 1320 aa20.26■□□□□ 0.83
PDLIM7-201ENST00000355572 ACER1Q8TDN7 264 aa20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 TRIM34Q9BYJ4 488 aa20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-201ENST00000355572 ZYXQ15942 572 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 TMED8Q6PL24 325 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 CERS3Q8IU89 383 aa20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 SMCR8Q8TEV9 937 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
PDLIM7-201ENST00000355572 POLR3DP05423 398 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-201ENST00000355572 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
PDLIM7-201ENST00000355572 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-201ENST00000355572 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
PDLIM7-201ENST00000355572 MKI67P46013 3256 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 USP17L10C9JJH3 530 aa20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 SEPT2Q15019 361 aa20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 CERKLQ49MI3 558 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
PDLIM7-201ENST00000355572 GNRH1P01148 92 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 HOXA7P31268 230 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 FLT3LGP49771 235 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 FCGRTP55899 365 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 RAB3GAP1Q15042 981 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 FAM110CQ1W6H9 321 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 ABCB5Q2M3G0 1257 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 OSBP2Q969R2 916 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
PDLIM7-201ENST00000355572 A0A0G2JMZ2 1700 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 ELNP15502 786 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 PRMT2P55345 433 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 KIAA1755Q5JYT7 1200 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 GINM1Q9NU53 330 aa20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 COL11A1P12107 1806 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-201ENST00000355572 C19orf81C9J6K1 198 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 M0R2C6 588 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 GRK4P32298 578 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 Q3C1V9 767 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 SIAH1Q8IUQ4 282 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 RAET1EQ8TD07 263 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 TMOD4Q9NZQ9 345 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 MORF4L1Q9UBU8 362 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
PDLIM7-201ENST00000355572 USP17L12C9JPN9 530 aa20.18■□□□□ 0.82
PDLIM7-201ENST00000355572 USP17L21D6R901 530 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms