RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 USP32Q8NFA0 1604 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CCDC174Q6PII3 467 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CCDC186Q7Z3E2 898 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CCNT1O60563 726 aaKnown RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 CD209Q9NNX6 404 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 RGS12O14924 1447 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 A0A0G2JLW4 131 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 N4BP3O15049 544 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 PRR5LQ6MZQ0 368 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 BIN2Q9UBW5 565 aaPredicted RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 GPR162Q16538 588 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 NSMFQ6X4W1 530 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 MIGA2Q7L4E1 593 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 SUPT20HQ8NEM7 779 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 C3P01024 1663 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 NMT2O60551 498 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 TTC38Q5R3I4 469 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 BARGINQ6ZT62 677 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 NSUN7Q8NE18 718 aaKnown RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 CLIC6Q96NY7 704 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 ATP8A2Q9NTI2 1148 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
PCDHB11-201ENST00000354757 EPB41L2O43491 1005 aaKnown RBP14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 SLC16A2P36021 539 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 CCDC40Q4G0X9 1142 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 CSRNP1Q96S65 589 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 EXOC1Q9NV70 894 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 UBASH3AP57075 661 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 CERKLQ49MI3 558 aaPredicted RBP14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 KRT79Q5XKE5 535 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 SH3RF3Q8TEJ3 882 aaPredicted RBP14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 SYCP1Q15431 976 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 UBR1Q8IWV7 1749 aa14.03□□□□□ -0.16
PCDHB11-201ENST00000354757 NR1I2O75469 434 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 NTSR2O95665 410 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 NPR1P16066 1061 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 MRPL12P52815 198 aaKnown RBP14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 GPSM2P81274 684 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 NR5A1Q13285 461 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
PCDHB11-201ENST00000354757 ERICH4A6NGS2 130 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 BMP15O95972 392 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 AMPD3Q01432 767 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 ARHGAP29Q52LW3 1261 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 USP17L2Q6R6M4 530 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 KLRK1P26718 216 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 DCCP43146 1447 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 MYOM1P52179 1685 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 AOC3Q16853 763 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 ARHGEF10LQ9HCE6 1279 aa14.02□□□□□ -0.17
PCDHB11-201ENST00000354757 SMCO2A6NFE2 343 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 ZNF202O95125 648 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 INF2Q27J81 1249 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 EEF2KMTQ96G04 330 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 KIF2CQ99661 725 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 COL5A2P05997 1499 aaPredicted RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 MED23Q9ULK4 1368 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 ICA1Q05084 483 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 TDRD12Q587J7 1177 aaKnown RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 SYCP3Q8IZU3 236 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 MXD3Q9BW11 206 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 PICK1Q9NRD5 415 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 SERPINB13Q9UIV8 391 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 NCOA3Q9Y6Q9 1424 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 H7C1D1 291 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 NF2P35240 595 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 ODF2Q5BJF6 829 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 KCTD1Q719H9 257 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 TDRD3Q9H7E2 651 aaKnown RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 EHMT1Q9H9B1 1298 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 CLIC4Q9Y696 253 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 CSF1RP07333 972 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 IQUBQ8NA54 791 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms