RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 STMN2Q93045 179 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 SCYL1Q96KG9 808 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 MTRF1LQ9UGC7 380 aaKnown RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 KIF3CO14782 793 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 CAPN9O14815 690 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 DNM2P50570 870 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 KRT83P78385 493 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 NAP1L4Q99733 375 aaKnown RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 STMN4Q9H169 189 aaPredicted RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 CSADQ9Y600 493 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 OPA1O60313 960 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 KRT81Q14533 505 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 TTC31Q49AM3 519 aaPredicted RBP11.12□□□□□ -0.63
COL11A1-201ENST00000353414 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 ASIC3Q9UHC3 531 aa11.12□□□□□ -0.63
COL11A1-201ENST00000353414 WDR46O15213 610 aaKnown RBP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 UBXN2AP68543 259 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 RILPQ96NA2 401 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 DNAJC5Q9H3Z4 198 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 ALAS1P13196 640 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 VPS41P49754 854 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 TYRO3Q06418 890 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 UTP11Q9Y3A2 253 aaKnown RBP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 NEMFO60524 1076 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 GNAT2P19087 354 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 PLCB4Q15147 1175 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 CALCRLQ16602 461 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 TTC6Q86TZ1 520 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 SMYD2Q9NRG4 433 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 SAMD15Q9P1V8 674 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
COL11A1-201ENST00000353414 F13A1P00488 732 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 PBRM1Q86U86 1689 aa11.11□□□□□ -0.63
COL11A1-201ENST00000353414 A0A1B0GUL7 405 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 NUCB1Q02818 461 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 GBP7Q8N8V2 638 aaPredicted RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 KCNQ4P56696 695 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 LUC7L2Q9Y383 392 aaKnown RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 CLRN2A0PK11 232 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 DLGAP5Q15398 846 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 GDAP1L1Q96MZ0 367 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ARAP1Q96P48 1450 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 RPL13P26373 211 aaKnown RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 TBC1D8BQ0IIM8 1120 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ALKBH8Q96BT7 664 aaKnown RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 NKIRAS1Q9NYS0 192 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ABCB4P21439 1286 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 ALDH3A1P30838 453 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 GANCQ8TET4 914 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
COL11A1-201ENST00000353414 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
COL11A1-201ENST00000353414 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 RPS6KA2Q15349 733 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 HP1BP3Q5SSJ5 553 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 NME8Q8N427 588 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 CTTNBP2NLQ9P2B4 639 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 EXOC3O60645 756 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 SLC12A2P55011 1212 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 PHLDB2Q86SQ0 1253 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 SYNDIG1LA6NDD5 238 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 DLATP10515 647 aaKnown RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 EEPD1Q7L9B9 569 aa11.09□□□□□ -0.63
COL11A1-201ENST00000353414 DCPSQ96C86 337 aaKnown RBP11.09□□□□□ -0.63
COL11A1-201ENST00000353414 PAXBP1Q9Y5B6 917 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms