RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 GOLGA6L19H0YKK7 550 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 PPARAQ07869 468 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 TPD52L1Q16890 204 aaPredicted RBP9.96□□□□□ -0.82
TRIM55-204ENST00000353317 NCOA7Q8NI08 942 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 USP28Q96RU2 1077 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 ZKSCAN3Q9BRR0 538 aa9.96□□□□□ -0.82
TRIM55-204ENST00000353317 LLPHQ9BRT6 129 aaKnown RBP9.96□□□□□ -0.82
TRIM55-204ENST00000353317 USP27XA6NNY8 438 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 PRDM1O75626 825 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 GNAT2P19087 354 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 PTGER2P43116 358 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 SCNN1DP51172 638 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 RHBDL3P58872 404 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 CCT2P78371 535 aaKnown RBP9.95□□□□□ -0.82
TRIM55-204ENST00000353317 AKNAD1Q5T1N1 836 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 TTLL6Q8N841 843 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 MRFAP1L1Q96HT8 127 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 PAXBP1Q9Y5B6 917 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
TRIM55-204ENST00000353317 PDIA3P30101 505 aaKnown RBP9.95□□□□□ -0.82
TRIM55-204ENST00000353317 STX1AQ16623 288 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-204ENST00000353317 DHX40Q8IX18 779 aaKnown RBP9.95□□□□□ -0.82
TRIM55-204ENST00000353317 MTFR1LQ9H019 292 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 MROH7-TTC4A0A0A0MT08 1334 aa9.95□□□□□ -0.82
TRIM55-204ENST00000353317 LAMB1P07942 1786 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 GPR75-ASB3A0A0A6YYF3 556 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 CTAGE5O15320 804 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 ECE2O60344 883 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 BTDP43251 543 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 SYCP1Q15431 976 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 CCDC112Q8NEF3 446 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 ENGASEQ8NFI3 743 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 TGFBRAP1Q8WUH2 860 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 STAG1Q8WVM7 1258 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-204ENST00000353317 MYH1P12882 1939 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 FOCADQ5VW36 1801 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 SLURP2P0DP57 97 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 RXRAP19793 462 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 EVCP57679 992 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 PPP4CP60510 307 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
TRIM55-204ENST00000353317 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 FBXL16Q8N461 479 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 PPP1R1BQ9UD71 204 aaPredicted RBP9.94□□□□□ -0.82
TRIM55-204ENST00000353317 DAGLAQ9Y4D2 1042 aa9.94□□□□□ -0.82
TRIM55-204ENST00000353317 BECN2A8MW95 431 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 SKILP12757 684 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 PLCD1P51178 756 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 GUCY1B3Q02153 619 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 DACT2Q5SW24 774 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 FILIP1Q7Z7B0 1213 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 DYNLL2Q96FJ2 89 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 FEZ1Q99689 392 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 NACAP1Q9BZK3 213 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 ANAPC4Q9UJX5 808 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 GAKO14976 1311 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 NAV1Q8NEY1 1877 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 BAZ2BQ9UIF8 2168 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 SH2B2O14492 632 aaPredicted RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 MFSD6Q6ZSS7 791 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 MAPKAPK5Q8IW41 473 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 MYL10Q9BUA6 226 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 CRNKL1Q9BZJ0 848 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 TTF2Q9UNY4 1162 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 DDX60LQ5H9U9 1706 aaKnown RBP9.93□□□□□ -0.82
TRIM55-204ENST00000353317 FER1L6Q2WGJ9 1857 aa9.93□□□□□ -0.82
TRIM55-204ENST00000353317 NMT2O60551 498 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 ME1P48163 572 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 CCZ1BP86790 482 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 CCZ1P86791 482 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 KIAA0825Q8IV33 1275 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 SLC44A5Q8NCS7 719 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 DDX4Q9NQI0 724 aaKnown RBP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 MCM9Q9NXL9 1143 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 SAP30BPQ9UHR5 308 aaKnown RBP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 PSME4Q14997 1843 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 ECM29Q5VYK3 1845 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 KLF18A0A0U1RQI7 1052 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 CCDC69A6NI79 296 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 UBE2Q2LH0YL09 131 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 NEMFO60524 1076 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 FGRP09769 529 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms