RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ERLIN2O94905 339 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 BMP6P22004 513 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 TIMM10P62072 90 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
TRAF3-202ENST00000351691 CXorf56Q9H5V9 222 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
TRAF3-202ENST00000351691 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 SOWAHDA6NJG2 315 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 RHOXF2BP0C7M4 288 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 HSPD1P10809 573 aaKnown RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 ERCC5P28715 1186 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MTF1Q14872 753 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 RHOXF2Q9BQY4 288 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 TARSL2A2RTX5 802 aaKnown RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-202ENST00000351691 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MAP3K14Q99558 947 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 DONSONQ9NYP3 566 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 CEP83Q9Y592 693 aa16.94■□□□□ 0.3
TRAF3-202ENST00000351691 MAST3O60307 1309 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 PCCAP05165 728 aaPredicted RBP16.93■□□□□ 0.3
TRAF3-202ENST00000351691 PBX1P40424 430 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 AMPD2Q01433 879 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 MORC3Q14149 939 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
TRAF3-202ENST00000351691 LONRF3Q496Y0 759 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 SLC35F6Q8N357 371 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
TRAF3-202ENST00000351691 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 CDC27P30260 824 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
TRAF3-202ENST00000351691 ZC3H4Q9UPT8 1303 aaKnown RBP16.92■□□□□ 0.3
TRAF3-202ENST00000351691 EXOC5O00471 708 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 SEMA3EO15041 775 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 USP14P54578 494 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 PTPN21Q16825 1174 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 ANKRD20A12PQ8NF67 263 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 ITIH6Q6UXX5 1313 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 MFAP3LO75121 409 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 PHACTR2O75167 634 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 CHGBP05060 677 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 PLCD1P51178 756 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRAF3-202ENST00000351691 GBP6Q6ZN66 633 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 GPATCH11Q8N954 259 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
TRAF3-202ENST00000351691 MYO6Q9UM54 1294 aa16.92■□□□□ 0.3
TRAF3-202ENST00000351691 A6NNZ2 444 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 EBAG9O00559 213 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 CPLX1O14810 134 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 CSF1RP07333 972 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 MAP2K2P36507 400 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 TUBB8Q3ZCM7 444 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 TTC39AQ5SRH9 613 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAF3-202ENST00000351691 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
TRAF3-202ENST00000351691 CTAGE1Q96RT6 745 aa16.91■□□□□ 0.3
TRAF3-202ENST00000351691 COL14A1Q05707 1796 aaKnown RBP16.91■□□□□ 0.3
TRAF3-202ENST00000351691 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 HNRNPH1P31943 449 aaKnown RBP16.9■□□□□ 0.3
TRAF3-202ENST00000351691 STIM1Q13586 685 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 POSTNQ15063 836 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 APTXQ7Z2E3 356 aaKnown RBP16.9■□□□□ 0.3
TRAF3-202ENST00000351691 CNPY4Q8N129 248 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
TRAF3-202ENST00000351691 RBL2Q08999 1139 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 E2F4Q16254 413 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 STAG1Q8WVM7 1258 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 FAM169AQ9Y6X4 670 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
TRAF3-202ENST00000351691 PPFIA3O75145 1194 aa16.89■□□□□ 0.29
TRAF3-202ENST00000351691 CDKL5O76039 1030 aa16.89■□□□□ 0.29
TRAF3-202ENST00000351691 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
TRAF3-202ENST00000351691 VPS37DQ86XT2 251 aa16.89■□□□□ 0.29
TRAF3-202ENST00000351691 MB21D2Q8IYB1 491 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms