RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 USP28Q96RU2 1077 aa26.14■■□□□ 1.77
TNFRSF10B-202ENST00000347739 PDGFDQ9GZP0 370 aaPredicted RBP26.14■■□□□ 1.77
TNFRSF10B-202ENST00000347739 TTF2Q9UNY4 1162 aaKnown RBP26.14■■□□□ 1.77
TNFRSF10B-202ENST00000347739 PLCD1P51178 756 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 TRIM29Q14134 588 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 HHIPL2Q6UWX4 724 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 ANKS1AQ92625 1134 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 DYNLL2Q96FJ2 89 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 RNF26Q9BY78 433 aaPredicted RBP26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 GJB4Q9NTQ9 266 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 TCP11L1Q9NUJ3 509 aa26.13■■□□□ 1.77
TNFRSF10B-202ENST00000347739 GOLGA6L4A6NEF3 574 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 GRIPAP1Q4V328 841 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 C16orf86Q6ZW13 317 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 DGKHQ86XP1 1220 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MKNK2Q9HBH9 465 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 RTEL1Q9NZ71 1219 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 KIF13BQ9NQT8 1826 aa26.12■■□□□ 1.77
TNFRSF10B-202ENST00000347739 TFAP4Q01664 338 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 STRIP1Q5VSL9 837 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 RCSD1Q6JBY9 416 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 SUPT20HQ8NEM7 779 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 PGBD1Q96JS3 809 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 DBNDD1Q9H9R9 158 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 SAP30BPQ9UHR5 308 aaKnown RBP26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MYH6P13533 1939 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 KIF28PB7ZC32 967 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 NMT2O60551 498 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 SLC4A8Q2Y0W8 1093 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MYSM1Q5VVJ2 828 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MRIQ9BWK5 157 aa26.11■■□□□ 1.77
TNFRSF10B-202ENST00000347739 SCN9AQ15858 1988 aa26.1■■□□□ 1.77
TNFRSF10B-202ENST00000347739 ECE2O60344 883 aa26.1■■□□□ 1.77
TNFRSF10B-202ENST00000347739 FUT2Q10981 343 aa26.1■■□□□ 1.77
TNFRSF10B-202ENST00000347739 POLR3EQ9NVU0 708 aa26.1■■□□□ 1.77
TNFRSF10B-202ENST00000347739 RASA1P20936 1047 aa26.09■■□□□ 1.77
TNFRSF10B-202ENST00000347739 U2AF2P26368 475 aaKnown RBP eCLIP26.09■■□□□ 1.772e-7■■■□□ 19.1
TNFRSF10B-202ENST00000347739 KIAA2012Q0VF49 1180 aa26.09■■□□□ 1.77
TNFRSF10B-202ENST00000347739 TEKT1Q969V4 418 aa26.09■■□□□ 1.77
TNFRSF10B-202ENST00000347739 IL17RBQ9NRM6 502 aa26.09■■□□□ 1.77
TNFRSF10B-202ENST00000347739 ADAMTSL1Q8N6G6 1762 aa26.09■■□□□ 1.77
TNFRSF10B-202ENST00000347739 F8W031 263 aaPredicted RBP26.08■■□□□ 1.77
TNFRSF10B-202ENST00000347739 ZNF444Q8N0Y2 327 aaPredicted RBP26.08■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MAP3K14Q99558 947 aa26.08■■□□□ 1.77
TNFRSF10B-202ENST00000347739 MXD3Q9BW11 206 aa26.08■■□□□ 1.77
TNFRSF10B-202ENST00000347739 FTOQ9C0B1 505 aaKnown RBP eCLIP26.08■■□□□ 1.77
TNFRSF10B-202ENST00000347739 YEATS4O95619 227 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TSPY3P0CV98 308 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TSPY8P0CW00 308 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 GUCY1A2P33402 732 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 DACT2Q5SW24 774 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CCDC125Q86Z20 511 aa26.08■■□□□ 1.76
TNFRSF10B-202ENST00000347739 UBE2Q2LH0YL09 131 aa26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PRPF3O43395 683 aaKnown RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 LIG1P18858 919 aa26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 NASPP49321 788 aaPredicted RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CDK8P49336 464 aa26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 HDLBPQ00341 1268 aaKnown RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CEBPZQ03701 1054 aaKnown RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TMTC3Q6ZXV5 915 aa26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CTCFLQ8NI51 663 aaPredicted RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 ZNF219Q9P2Y4 722 aaPredicted RBP26.07■■□□□ 1.76
TNFRSF10B-202ENST00000347739 MMP1P03956 469 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TPRNQ4KMQ1 711 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TTLL6Q8N841 843 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 SLC44A5Q8NCS7 719 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 KAT14Q9H8E8 782 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 DDX19AQ9NUU7 478 aaKnown RBP26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PSME4Q14997 1843 aa26.06■■□□□ 1.76
TNFRSF10B-202ENST00000347739 USP17L3A6NCW0 530 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 USP17L4A6NCW7 530 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 WDHD1O75717 1129 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 AKAP17AQ02040 695 aaKnown RBP26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 USP17L1Q7RTZ2 530 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CMTR1Q8N1G2 835 aaKnown RBP26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 LINC00301Q8NCQ3 95 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 BICD2Q8TD16 824 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 ZDHHC15Q96MV8 337 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PANK2Q9BZ23 570 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 TSPY26PQ9H489 355 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 KCNQ5Q9NR82 932 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 SCNN1DP51172 638 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 AOC3Q16853 763 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 APOBEC3HQ6NTF7 200 aaKnown RBP26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CCDC82Q8N4S0 544 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 KCNG4Q8TDN1 519 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 RBSNQ9H1K0 784 aa26.05■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PLEKHA8P1O95397 391 aa26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 KIF5BP33176 963 aa26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CRKP46108 304 aa26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 SAFBQ15424 915 aaKnown RBP eCLIP26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 USP40Q9NVE5 1235 aa26.04■■□□□ 1.76
TNFRSF10B-202ENST00000347739 C21orf2O43822 256 aa26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 GNL2Q13823 731 aaKnown RBP26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PKN1Q16512 942 aa26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CCDC93Q567U6 631 aa26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 CDC42EP5Q6NZY7 148 aa26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 RTKN2Q8IZC4 609 aa26.03■■□□□ 1.76
TNFRSF10B-202ENST00000347739 PNMA1Q8ND90 353 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms