RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TFRCP02786 760 aaKnown RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 CYP7A1P22680 504 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 LIFRP42702 1097 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TRDNQ13061 729 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TTF1Q15361 905 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 KRBA2Q6ZNG9 492 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 MFSD6Q6ZSS7 791 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TICAM2Q86XR7 235 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 NOSTRINQ8IVI9 506 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 CEP57L1Q8IYX8 460 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 MTRQ99707 1265 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 CSRNP2Q9H175 543 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF446Q9NWS9 450 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 KCNH3Q9ULD8 1083 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 SCN7AQ01118 1682 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 NUTM2BA6NNL0 878 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 NUTM2EB1AL46 878 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 IFNAR1P17181 557 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 CDC25AP30304 524 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TDO2P48775 406 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 KMT5BQ4FZB7 885 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TRIM65Q6PJ69 517 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 NUTM2AQ8IVF1 878 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 FANCBQ8NB91 859 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 LRRC15Q8TF66 581 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 ZBTB9Q96C00 473 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 MAN1B1Q9UKM7 699 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 LTBP4Q8N2S1 1624 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 DUOX1Q9NRD9 1551 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TNKSO95271 1327 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 NKRFO15226 690 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 ACTN4O43707 911 aaKnown RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 PPP6R2O75170 966 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 SLC5A1P13866 664 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 PRDX5P30044 214 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 MTF1Q14872 753 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 CTR9Q6PD62 1173 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 APTXQ7Z2E3 356 aaKnown RBP6.97□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TMEM87BQ96K49 555 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 BPIFA3Q9BQP9 254 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 LRP2BPQ9P2M1 347 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF804BA4D1E1 1349 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 TEX33O43247 280 aa6.96□□□□□ -1.29
CLCN3-201ENST00000347613 SARSP49591 514 aaKnown RBP6.96□□□□□ -1.29
CLCN3-201ENST00000347613 SSRP1Q08945 709 aaKnown RBP6.96□□□□□ -1.29
CLCN3-201ENST00000347613 DDB1Q16531 1140 aa6.96□□□□□ -1.29
CLCN3-201ENST00000347613 IRX2Q9BZI1 471 aaPredicted RBP6.96□□□□□ -1.29
CLCN3-201ENST00000347613 SBF2Q86WG5 1849 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 SMTNL1A8MU46 457 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 DHX16O60231 1041 aaKnown RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 UQCRFS1P1P0C7P4 283 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 CHRM1P11229 460 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 ADKP55263 362 aaKnown RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 MAP3K12Q12852 859 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 SYT10Q6XYQ8 523 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 REXO1L1PQ8IX06 675 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 SRBD1Q8N5C6 995 aaKnown RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 KCNG1Q9UIX4 513 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 DLEC1Q9Y238 1755 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 PNPLA7Q6ZV29 1317 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 TNRC6CQ9HCJ0 1690 aaKnown RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 PTPREP23469 700 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 TROAPQ12815 778 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 WTAPQ15007 396 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 ELF2Q15723 593 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 TYW1BQ6NUM6 668 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 PDCL2Q8N4E4 241 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 TNFRSF25Q93038 417 aa6.96□□□□□ -1.3
CLCN3-201ENST00000347613 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-201ENST00000347613 COL22A1Q8NFW1 1626 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-201ENST00000347613 TPM3P06753 285 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 TM4SF1P30408 202 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 RTN1Q16799 776 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 CCDC93Q567U6 631 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 TOGARAM2Q6ZUX3 1019 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 CPVLQ9H3G5 476 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 AATFQ9NY61 560 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLCN3-201ENST00000347613 NID2Q14112 1375 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 KIAA1551Q9HCM1 1747 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L12C9JPN9 530 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L21D6R901 530 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 STX17P56962 302 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 MECOMQ03112 1051 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 CNNM3Q8NE01 707 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 RAI14Q9P0K7 980 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 IRS2Q9Y4H2 1338 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 SLURP2P0DP57 97 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 ZNF18P17022 549 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 AFMP43652 599 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 UBASH3AP57075 661 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 PTPN14Q15678 1187 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 ZNF174Q15697 407 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms