RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 GOLPH3LQ9H4A5 285 aa17.34■□□□□ 0.37
CTTN-202ENST00000346329 PLEKHG2Q9H7P9 1386 aa17.34■□□□□ 0.37
CTTN-202ENST00000346329 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
CTTN-202ENST00000346329 ZNF174Q15697 407 aa17.33■□□□□ 0.37
CTTN-202ENST00000346329 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.37
CTTN-202ENST00000346329 KCTD1Q719H9 257 aa17.33■□□□□ 0.37
CTTN-202ENST00000346329 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.37
CTTN-202ENST00000346329 DIS3L2Q8IYB7 885 aaKnown RBP17.33■□□□□ 0.36
CTTN-202ENST00000346329 EYA3Q99504 573 aa17.33■□□□□ 0.36
CTTN-202ENST00000346329 KAT14Q9H8E8 782 aa17.33■□□□□ 0.36
CTTN-202ENST00000346329 PTMAP06454 111 aaKnown RBP17.32■□□□□ 0.36
CTTN-202ENST00000346329 SDF4Q9BRK5 362 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 RTFDC1Q9BY42 306 aaPredicted RBP17.32■□□□□ 0.36
CTTN-202ENST00000346329 IL17RBQ9NRM6 502 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 AKR1B1P15121 316 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 PDE4BQ07343 736 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 LUZP1Q86V48 1076 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 ASTN2O75129 1339 aaPredicted RBP17.32■□□□□ 0.36
CTTN-202ENST00000346329 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
CTTN-202ENST00000346329 ATP6V1DQ9Y5K8 247 aa17.32■□□□□ 0.36
CTTN-202ENST00000346329 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 PNMA1Q8ND90 353 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 EEF2KMTQ96G04 330 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 FLT1P17948 1338 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 CDK8P49336 464 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 TTBK2Q6IQ55 1244 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 AMOTL1Q8IY63 956 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 SRBD1Q8N5C6 995 aaKnown RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 CEP95Q96GE4 821 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
CTTN-202ENST00000346329 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 TRIM22Q8IYM9 498 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 DNAJC25Q9H1X3 360 aa17.31■□□□□ 0.36
CTTN-202ENST00000346329 YDJCA8MPS7 323 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 CDC42EP5Q6NZY7 148 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 FBXO18Q8NFZ0 1043 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
CTTN-202ENST00000346329 SHISA4Q96DD7 197 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 GNAT2P19087 354 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 STAG1Q8WVM7 1258 aa17.3■□□□□ 0.36
CTTN-202ENST00000346329 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
CTTN-202ENST00000346329 FOXN1O15353 648 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 CRKP46108 304 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 UBE2HP62256 183 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 SLC30A10Q6XR72 485 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 ZMYM6O95789 1325 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 MCM7P33993 719 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 NLRP5P59047 1200 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 COA7Q96BR5 231 aa17.29■□□□□ 0.36
CTTN-202ENST00000346329 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
CTTN-202ENST00000346329 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 CNNM2Q9H8M5 875 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
CTTN-202ENST00000346329 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 NDUFA8P51970 172 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 HMGN5P82970 282 aaKnown RBP17.28■□□□□ 0.36
CTTN-202ENST00000346329 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
CTTN-202ENST00000346329 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 TTLL6Q8N841 843 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 NUP62CLQ9H1M0 184 aa17.28■□□□□ 0.36
CTTN-202ENST00000346329 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
CTTN-202ENST00000346329 PSMD14O00487 310 aa17.27■□□□□ 0.36
CTTN-202ENST00000346329 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
CTTN-202ENST00000346329 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
CTTN-202ENST00000346329 RHBDL3P58872 404 aa17.27■□□□□ 0.36
CTTN-202ENST00000346329 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
CTTN-202ENST00000346329 WDHD1O75717 1129 aaPredicted RBP17.27■□□□□ 0.35
CTTN-202ENST00000346329 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.35
CTTN-202ENST00000346329 ERCC3P19447 782 aa17.27■□□□□ 0.35
CTTN-202ENST00000346329 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.35
CTTN-202ENST00000346329 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.35
CTTN-202ENST00000346329 TEKT1Q969V4 418 aa17.27■□□□□ 0.35
CTTN-202ENST00000346329 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.35
CTTN-202ENST00000346329 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 NTRK3Q16288 839 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 NBPF9Q3BBW0 867 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 TMEM87BQ96K49 555 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 TMEM39BQ9GZU3 492 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
CTTN-202ENST00000346329 RASA1P20936 1047 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms