RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NDUFA8P51970 172 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 DENND2CQ68D51 928 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 SSH3Q8TE77 659 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 RAB17Q9H0T7 212 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 ANAPC4Q9UJX5 808 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 KDM5AP29375 1690 aaKnown RBP20.12■□□□□ 0.81
SMC4-201ENST00000344722 CD109Q6YHK3 1445 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 GUCY2FP51841 1108 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 E7EWF7 191 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 EEF2P13639 858 aaKnown RBP20.12■□□□□ 0.81
SMC4-201ENST00000344722 PHLDB2Q86SQ0 1253 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
SMC4-201ENST00000344722 APPBP2Q92624 585 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 TRIM31Q9BZY9 425 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 HS2ST1Q7LGA3 356 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 MAGEB6Q8N7X4 407 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 DBNDD2Q9BQY9 259 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 ZNF131P52739 623 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 BEND3Q5T5X7 828 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 ATP10BO94823 1461 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 KCNJ18B7U540 433 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 PLCB3Q01970 1234 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 KCNJ12Q14500 433 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 MMS22LQ6ZRQ5 1243 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 PARP2Q9UGN5 583 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 PLCH2O75038 1416 aa20.11■□□□□ 0.81
SMC4-201ENST00000344722 RBBP5Q15291 538 aaKnown RBP20.1■□□□□ 0.81
SMC4-201ENST00000344722 GBP5Q96PP8 586 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 CSRNP2Q9H175 543 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 CCDC62Q6P9F0 684 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 TBC1D31Q96DN5 1066 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 TACO1Q9BSH4 297 aaKnown RBP20.1■□□□□ 0.81
SMC4-201ENST00000344722 RGS16O15492 202 aaPredicted RBP20.1■□□□□ 0.81
SMC4-201ENST00000344722 SPATA1Q5VX52 437 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 EYA1Q99502 592 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 ODF2LQ9ULJ1 636 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 STK38LQ9Y2H1 464 aa20.1■□□□□ 0.81
SMC4-201ENST00000344722 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.1■□□□□ 0.815e-47■■■■■ 274.1
SMC4-201ENST00000344722 SFMBT2Q5VUG0 894 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.811e-26■■■■■ 198.7
SMC4-201ENST00000344722 TYW1BQ6NUM6 668 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 SLC35F6Q8N357 371 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 DCAF17Q5H9S7 520 aaPredicted RBP20.09■□□□□ 0.81
SMC4-201ENST00000344722 SARM1Q6SZW1 724 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 PIK3AP1Q6ZUJ8 805 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 TNFAIP3P21580 790 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 TMOD2Q9NZR1 351 aa20.09■□□□□ 0.81
SMC4-201ENST00000344722 EPB41P11171 864 aaKnown RBP20.08■□□□□ 0.81
SMC4-201ENST00000344722 ARID4AP29374 1257 aaPredicted RBP20.08■□□□□ 0.81
SMC4-201ENST00000344722 GJC1P36383 396 aa20.08■□□□□ 0.81
SMC4-201ENST00000344722 MUM1Q2TAK8 710 aa20.08■□□□□ 0.81
SMC4-201ENST00000344722 MORC3Q14149 939 aa20.08■□□□□ 0.81
SMC4-201ENST00000344722 ZKSCAN3Q9BRR0 538 aa20.08■□□□□ 0.81
SMC4-201ENST00000344722 EPN1Q9Y6I3 576 aaPredicted RBP20.08■□□□□ 0.81
SMC4-201ENST00000344722 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
SMC4-201ENST00000344722 FAM13AO94988 1023 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 ATP5JP18859 108 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 HOMER3Q9NSC5 361 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 KLHL14Q9P2G3 628 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 SPOPO43791 374 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 PHKBQ93100 1093 aa20.08■□□□□ 0.8
SMC4-201ENST00000344722 ZNF622Q969S3 477 aaKnown RBP eCLIP20.08■□□□□ 0.85e-8■■□□□ 11.5
SMC4-201ENST00000344722 MAGI2Q86UL8 1455 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 FLOT1O75955 427 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 DNM2P50570 870 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 KLHL30Q0D2K2 578 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 SLC39A6Q13433 755 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 PEX26Q7Z412 305 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
SMC4-201ENST00000344722 EPHB4P54760 987 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 RAD51AP2Q09MP3 1159 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 CCDC170Q8IYT3 715 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 EYA2O00167 538 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 IFT88Q13099 833 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 SH2D4BQ5SQS7 431 aa20.07■□□□□ 0.8
SMC4-201ENST00000344722 PEX19P40855 299 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 PPP2R5EQ16537 467 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 VPS52Q8N1B4 723 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 BICD1Q96G01 975 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 ACTR5Q9H9F9 607 aaPredicted RBP20.06■□□□□ 0.8
SMC4-201ENST00000344722 PLXNC1O60486 1568 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 GPAA1O43292 621 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 HHATQ5VTY9 493 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 MBD4O95243 580 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 CASP8Q14790 479 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 E2F4Q16254 413 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 JPH2Q9BR39 696 aaPredicted RBP20.06■□□□□ 0.8
SMC4-201ENST00000344722 ADAM21Q9UKJ8 722 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 CLTAP09496 248 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 DPCR1Q3MIW9 517 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
SMC4-201ENST00000344722 HGSO14964 777 aaPredicted RBP20.05■□□□□ 0.8
SMC4-201ENST00000344722 KMT5BQ4FZB7 885 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 SYNMO15061 1565 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms