RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MYH1P12882 1939 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 PHIPQ8WWQ0 1821 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
ATG4B-201ENST00000344376 GNRH1P01148 92 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
ATG4B-201ENST00000344376 NAV1Q8NEY1 1877 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 ATAD5Q96QE3 1844 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 MX1P20591 662 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 PLCD1P51178 756 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 MTMR2Q13614 643 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 SLFNL1Q499Z3 407 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 CERKLQ49MI3 558 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-201ENST00000344376 SH3D19Q5HYK7 790 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 CABP5Q9NP86 173 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
ATG4B-201ENST00000344376 GH2P01242 217 aa19.34■□□□□ 0.69
ATG4B-201ENST00000344376 ZFYP08048 801 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-201ENST00000344376 BACE1P56817 501 aa19.34■□□□□ 0.69
ATG4B-201ENST00000344376 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
ATG4B-201ENST00000344376 TREML2Q5T2D2 321 aa19.34■□□□□ 0.69
ATG4B-201ENST00000344376 RWDD1Q9H446 243 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-201ENST00000344376 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
ATG4B-201ENST00000344376 C19orf81C9J6K1 198 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 USP17L10C9JJH3 530 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 PRKAB2O43741 272 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 OSBPP22059 807 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 JAG1P78504 1218 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 ARHGAP39Q9C0H5 1083 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 SLC4A4Q9Y6R1 1079 aa19.33■□□□□ 0.69
ATG4B-201ENST00000344376 PTPRFP10586 1907 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 RNF113AO15541 343 aaKnown RBP19.32■□□□□ 0.68
ATG4B-201ENST00000344376 CHGBP05060 677 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 BCRP11274 1271 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 HOXD10P28358 340 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 SHMT1P34896 483 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 PSMC4P43686 418 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 PRMT2P55345 433 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 SOX10P56693 466 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 RAB3GAP1Q15042 981 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-201ENST00000344376 APPBP2Q92624 585 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 FEZ1Q99689 392 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 PUS7LQ9H0K6 701 aaKnown RBP19.32■□□□□ 0.68
ATG4B-201ENST00000344376 SWAP70Q9UH65 585 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 FMNL1O95466 1100 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-201ENST00000344376 CAP1Q01518 475 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 GABPAQ06546 454 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 SHROOM1Q2M3G4 852 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-201ENST00000344376 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
ATG4B-201ENST00000344376 MYH7P12883 1935 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 LOC285556D6RIA3 1793 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 RGS19P49795 217 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 FCGRTP55899 365 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 EXOC6Q8TAG9 804 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 FSD1Q9BTV5 496 aa19.31■□□□□ 0.68
ATG4B-201ENST00000344376 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
ATG4B-201ENST00000344376 ECM2O94769 699 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-201ENST00000344376 CYP2D6P10635 497 aa19.3■□□□□ 0.68
ATG4B-201ENST00000344376 GCLCP48506 637 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-201ENST00000344376 IRX3P78415 501 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-201ENST00000344376 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
ATG4B-201ENST00000344376 TRIM47Q96LD4 638 aa19.3■□□□□ 0.68
ATG4B-201ENST00000344376 PTCH2Q9Y6C5 1203 aa19.3■□□□□ 0.68
ATG4B-201ENST00000344376 MPHOSPH10O00566 681 aaKnown RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 USP14P54578 494 aa19.29■□□□□ 0.68
ATG4B-201ENST00000344376 MLLT1Q03111 559 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
ATG4B-201ENST00000344376 NBPF11Q86T75 865 aa19.29■□□□□ 0.68
ATG4B-201ENST00000344376 STRBPQ96SI9 672 aaKnown RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 ASCC2Q9H1I8 757 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 ARPP21Q9UBL0 812 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-201ENST00000344376 USP17L12C9JPN9 530 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 USP17L21D6R901 530 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 GNAT2P19087 354 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 ANKRD13CQ8N6S4 541 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 OSBP2Q969R2 916 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 ARMC5Q96C12 935 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 SRRDQ9UH36 339 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 SALL3Q9BXA9 1300 aa19.28■□□□□ 0.68
ATG4B-201ENST00000344376 HOXA7P31268 230 aaPredicted RBP19.27■□□□□ 0.68
ATG4B-201ENST00000344376 FAM110CQ1W6H9 321 aa19.27■□□□□ 0.68
ATG4B-201ENST00000344376 GIMAP6Q6P9H5 292 aa19.27■□□□□ 0.68
ATG4B-201ENST00000344376 DYNLL2Q96FJ2 89 aa19.27■□□□□ 0.68
ATG4B-201ENST00000344376 MYPNQ86TC9 1320 aa19.27■□□□□ 0.68
ATG4B-201ENST00000344376 GPAA1O43292 621 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 EVX2Q03828 476 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 TMEM179Q6ZVK1 233 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 SMC5Q8IY18 1101 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 RAET1EQ8TD07 263 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 KIAA1683Q9H0B3 1180 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 STAP2Q9UGK3 403 aa19.27■□□□□ 0.67
ATG4B-201ENST00000344376 CTGFP29279 349 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 PDE1AP54750 535 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 SEPT2Q15019 361 aa19.26■□□□□ 0.67
ATG4B-201ENST00000344376 ZYXQ15942 572 aaKnown RBP19.26■□□□□ 0.67
ATG4B-201ENST00000344376 CTR9Q6PD62 1173 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms