RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TCP10Q12799 353 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 NFIAQ12857 509 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 DOCK1Q14185 1865 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 EDC3Q96F86 508 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 GABRQQ9UN88 632 aa16.08■□□□□ 0.16
HERPUD1-202ENST00000344114 GOLIM4O00461 696 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 SGPL1O95470 568 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 CYP2C8P10632 490 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 CAPN2P17655 700 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 UNC93B1Q9H1C4 597 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 FAM198AQ9UFP1 575 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
HERPUD1-202ENST00000344114 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
HERPUD1-202ENST00000344114 ADCY3O60266 1144 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 PRDX5P30044 214 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 MCM2P49736 904 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 PXYLP1Q8TE99 480 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 SLC45A1Q9Y2W3 748 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 NDUFB9Q9Y6M9 179 aa16.05■□□□□ 0.16
HERPUD1-202ENST00000344114 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 PHF20L1A8MW92 1017 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 ZFYP08048 801 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 PTH1RQ03431 593 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 IRF5Q13568 498 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 TTF1Q15361 905 aaPredicted RBP16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 MCMDC2Q4G0Z9 681 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 FASTKD5Q7L8L6 764 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 MAP4K1Q92918 833 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 KCNB2Q92953 911 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
HERPUD1-202ENST00000344114 SALL1Q9NSC2 1324 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 PTPRAP18433 802 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 FLT3LGP49771 235 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 MAP3K10Q02779 954 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 ZMYM1Q5SVZ6 1142 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 ZFPM1Q8IX07 1006 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
HERPUD1-202ENST00000344114 SOX1O00570 391 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 EVI5O60447 810 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 INHAP05111 366 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 MCAMP43121 646 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 RNF20Q5VTR2 975 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 CCDC102BQ68D86 513 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 ZNF589Q86UQ0 364 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 SLC17A8Q8NDX2 589 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 IDI2Q9BXS1 227 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
HERPUD1-202ENST00000344114 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.15
HERPUD1-202ENST00000344114 DLL1O00548 723 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 ZBTB22O15209 634 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 ENTPD3O75355 529 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 LDHBP07195 334 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 ELNP15502 786 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 ZAP70P43403 619 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 PHKA1P46020 1223 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 NEK4P51957 841 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 ZSCAN25Q6NSZ9 544 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■□□□□ 10.1
HERPUD1-202ENST00000344114 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
HERPUD1-202ENST00000344114 TNPO2O14787 897 aaKnown RBP16■□□□□ 0.15
HERPUD1-202ENST00000344114 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
HERPUD1-202ENST00000344114 SH3BP5LQ7L8J4 393 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 PICK1Q9NRD5 415 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 CIZ1Q9ULV3 898 aaPredicted RBP16■□□□□ 0.15
HERPUD1-202ENST00000344114 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
HERPUD1-202ENST00000344114 GAKO14976 1311 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 TFRCP02786 760 aaKnown RBP16■□□□□ 0.15
HERPUD1-202ENST00000344114 CREB3L3Q68CJ9 461 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 LRCH3Q96II8 777 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 DEFB118Q96PH6 123 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 DSCC1Q9BVC3 393 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
HERPUD1-202ENST00000344114 ATAD5Q96QE3 1844 aa15.99■□□□□ 0.15
HERPUD1-202ENST00000344114 SEMA3EO15041 775 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms