RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 CUL4AQ13619 759 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 APOBEC3HQ6NTF7 200 aaKnown RBP24.58■■□□□ 1.52
DUSP28-201ENST00000343217 HHIPL2Q6UWX4 724 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 CDAN1Q8IWY9 1227 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 SPRYD3Q8NCJ5 442 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 INTS4Q96HW7 963 aaKnown RBP24.58■■□□□ 1.52
DUSP28-201ENST00000343217 WNK4Q96J92 1243 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 SLKQ9H2G2 1235 aaPredicted RBP24.58■■□□□ 1.52
DUSP28-201ENST00000343217 RNF41Q9H4P4 317 aaPredicted RBP24.58■■□□□ 1.52
DUSP28-201ENST00000343217 CNNM2Q9H8M5 875 aa24.58■■□□□ 1.52
DUSP28-201ENST00000343217 DCP1AQ9NPI6 582 aaPredicted RBP24.58■■□□□ 1.52
DUSP28-201ENST00000343217 MCM5P33992 734 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 TNNI2P48788 182 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 FBXL16Q8N461 479 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 CFHR5Q9BXR6 569 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 TMEM39BQ9GZU3 492 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 NBPF3Q9H094 633 aa24.57■■□□□ 1.52
DUSP28-201ENST00000343217 TBC1D8O95759 1140 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 PPARAQ07869 468 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 AKNAD1Q5T1N1 836 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 NOL8Q76FK4 1167 aaKnown RBP24.56■■□□□ 1.52
DUSP28-201ENST00000343217 TBC1D10CQ8IV04 446 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 ANKRD13AQ8IZ07 590 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 STAG1Q8WVM7 1258 aa24.56■■□□□ 1.52
DUSP28-201ENST00000343217 ARPP21Q9UBL0 812 aaPredicted RBP24.56■■□□□ 1.52
DUSP28-201ENST00000343217 BAZ2AQ9UIF9 1905 aaKnown RBP24.56■■□□□ 1.52
DUSP28-201ENST00000343217 MANSC4A6NHS7 340 aaPredicted RBP24.55■■□□□ 1.52
DUSP28-201ENST00000343217 PCP11498 1178 aaKnown RBP24.55■■□□□ 1.52
DUSP28-201ENST00000343217 USP5P45974 858 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 INHBEP58166 350 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 FGD1P98174 961 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 SBK1Q52WX2 424 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 NOM1Q5C9Z4 860 aaKnown RBP24.55■■□□□ 1.52
DUSP28-201ENST00000343217 FKBP1CQ5VVH2 108 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 MFSD6Q6ZSS7 791 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 MB21D2Q8IYB1 491 aaPredicted RBP24.55■■□□□ 1.52
DUSP28-201ENST00000343217 AGXT2Q9BYV1 514 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 KRT23Q9C075 422 aa24.55■■□□□ 1.52
DUSP28-201ENST00000343217 CWC22Q9HCG8 908 aaKnown RBP24.55■■□□□ 1.52
DUSP28-201ENST00000343217 CCDC85CA6NKD9 419 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 TOB2Q14106 344 aaPredicted RBP24.54■■□□□ 1.52
DUSP28-201ENST00000343217 Q6ZUG5 572 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 SH3RF3Q8TEJ3 882 aaPredicted RBP24.54■■□□□ 1.52
DUSP28-201ENST00000343217 CIZ1Q9ULV3 898 aaPredicted RBP24.54■■□□□ 1.52
DUSP28-201ENST00000343217 DAGLAQ9Y4D2 1042 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 CACNB3P54284 484 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 COL9A3Q14050 684 aaPredicted RBP24.54■■□□□ 1.52
DUSP28-201ENST00000343217 FAM83AQ86UY5 434 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 TCEANC2Q96MN5 208 aa24.54■■□□□ 1.52
DUSP28-201ENST00000343217 MINDY4BA8MYZ0 360 aa24.53■■□□□ 1.52
DUSP28-201ENST00000343217 GJA5P36382 358 aa24.53■■□□□ 1.52
DUSP28-201ENST00000343217 CTDSPL2Q05D32 466 aa24.53■■□□□ 1.52
DUSP28-201ENST00000343217 CTR9Q6PD62 1173 aa24.53■■□□□ 1.52
DUSP28-201ENST00000343217 AMOTL1Q8IY63 956 aa24.53■■□□□ 1.52
DUSP28-201ENST00000343217 USP17L12C9JPN9 530 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 USP17L21D6R901 530 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 SLC3A2P08195 630 aaKnown RBP24.52■■□□□ 1.52
DUSP28-201ENST00000343217 CTU1Q7Z7A3 348 aaKnown RBP24.52■■□□□ 1.52
DUSP28-201ENST00000343217 TEX11Q8IYF3 940 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 ZNF296Q8WUU4 475 aaPredicted RBP24.52■■□□□ 1.52
DUSP28-201ENST00000343217 TMOD2Q9NZR1 351 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 CHMP5Q9NZZ3 219 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 NAV1Q8NEY1 1877 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 CDK5RAP2Q96SN8 1893 aa24.52■■□□□ 1.52
DUSP28-201ENST00000343217 GPR25O00155 361 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 ALDH1A1P00352 501 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 DDIT3P35638 169 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 NT5C2P49902 561 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 RHBDL3P58872 404 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.51■■□□□ 1.51
DUSP28-201ENST00000343217 IFNL1Q8IU54 200 aa24.51■■□□□ 1.51
DUSP28-201ENST00000343217 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.51■■□□□ 1.51
DUSP28-201ENST00000343217 PRC1O43663 620 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 MTA3Q9BTC8 594 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 R3HDMLQ9H3Y0 253 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 MCM9Q9NXL9 1143 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 TPCN1Q9ULQ1 816 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
DUSP28-201ENST00000343217 FOCADQ5VW36 1801 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 NEDD4P46934 1319 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.51
DUSP28-201ENST00000343217 TGFBRAP1Q8WUH2 860 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 BRF1Q92994 677 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 FOXD4L1Q9NU39 408 aa24.5■■□□□ 1.51
DUSP28-201ENST00000343217 B4E1Z4 1266 aa24.49■■□□□ 1.51
DUSP28-201ENST00000343217 IGF2BP3O00425 579 aaKnown RBP eCLIP24.49■■□□□ 1.51
DUSP28-201ENST00000343217 FGRP09769 529 aa24.49■■□□□ 1.51
DUSP28-201ENST00000343217 ME3Q16798 604 aa24.49■■□□□ 1.51
DUSP28-201ENST00000343217 TMEM87BQ96K49 555 aa24.49■■□□□ 1.51
DUSP28-201ENST00000343217 ELP3Q9H9T3 547 aa24.49■■□□□ 1.51
DUSP28-201ENST00000343217 TESPA1A2RU30 521 aaPredicted RBP24.48■■□□□ 1.51
DUSP28-201ENST00000343217 RGS19P49795 217 aa24.48■■□□□ 1.51
DUSP28-201ENST00000343217 MAP3K9P80192 1104 aa24.48■■□□□ 1.51
DUSP28-201ENST00000343217 CHMP4CQ96CF2 233 aa24.48■■□□□ 1.51
DUSP28-201ENST00000343217 OPTNQ96CV9 577 aa24.48■■□□□ 1.51
DUSP28-201ENST00000343217 LARP6Q9BRS8 491 aaKnown RBP24.48■■□□□ 1.51
DUSP28-201ENST00000343217 LRRC2Q9BYS8 371 aa24.48■■□□□ 1.51
DUSP28-201ENST00000343217 ANTXR2P58335 489 aa24.47■■□□□ 1.51
DUSP28-201ENST00000343217 VGLL4Q14135 290 aa24.47■■□□□ 1.51
DUSP28-201ENST00000343217 C12orf60Q5U649 245 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms