RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DOK7Q18PE1 504 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 NAP1L3Q99457 506 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 PRPF6O94906 941 aaKnown RBP16.73■□□□□ 0.27
UBE3B-202ENST00000342494 ALDH3A1P30838 453 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 RAD51AP2Q09MP3 1159 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 KCNK9Q9NPC2 374 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 PRDM10Q9NQV6 1147 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 TBC1D7Q9P0N9 293 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 KCNG1Q9UIX4 513 aa16.73■□□□□ 0.27
UBE3B-202ENST00000342494 TESPA1A2RU30 521 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-202ENST00000342494 CUTAO60888 179 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 GEN1Q17RS7 908 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 OTUD6AQ7L8S5 288 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 GPR161Q8N6U8 529 aaKnown RBP16.72■□□□□ 0.27
UBE3B-202ENST00000342494 CCT6BQ92526 530 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
UBE3B-202ENST00000342494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE3B-202ENST00000342494 KIAA0556O60303 1618 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-202ENST00000342494 OTUD7BQ6GQQ9 843 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 GAS7O60861 476 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 PPARAQ07869 468 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 ALAS1P13196 640 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 IGSF22Q8N9C0 903 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 CCDC26Q8TAB7 109 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
UBE3B-202ENST00000342494 SCNN1DP51172 638 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 DCUN1D2Q6PH85 259 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 METTL13Q8N6R0 699 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 RNF169Q8NCN4 708 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 NSMCE1Q8WV22 266 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 BAG1Q99933 345 aaPredicted RBP16.71■□□□□ 0.27
UBE3B-202ENST00000342494 CRCPO75575 148 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 GABPAQ06546 454 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 PAK1Q13153 545 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TRIM14Q14142 442 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 EP400NLQ6ZTU2 488 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 ANKS4BQ8N8V4 417 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 GABPB2Q8TAK5 448 aaPredicted RBP16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TRIM7Q9C029 511 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 USP17L21D6R901 530 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 PHKG2P15735 406 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TUBB4BP68371 445 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TRPC6Q9Y210 931 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 DEPTORQ8TB45 409 aa16.71■□□□□ 0.27
UBE3B-202ENST00000342494 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.26
UBE3B-202ENST00000342494 SGSM2O43147 1006 aa16.71■□□□□ 0.26
UBE3B-202ENST00000342494 C8orf34Q49A92 452 aa16.71■□□□□ 0.26
UBE3B-202ENST00000342494 CABP7Q86V35 215 aa16.71■□□□□ 0.26
UBE3B-202ENST00000342494 SPATA24Q86W54 205 aa16.71■□□□□ 0.26
UBE3B-202ENST00000342494 GYG1P46976 350 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 KRT40Q6A162 431 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 SMCO2A6NFE2 343 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 ATP8A2Q9NTI2 1148 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
UBE3B-202ENST00000342494 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
UBE3B-202ENST00000342494 WDR62O43379 1518 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 RHOXF2BP0C7M4 288 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 P4HA1P13674 534 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 RHOXF2Q9BQY4 288 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 TNNI1P19237 187 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 KMT5BQ4FZB7 885 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 NR1I2O75469 434 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-202ENST00000342494 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 CTTNBP2NLQ9P2B4 639 aa16.69■□□□□ 0.26
UBE3B-202ENST00000342494 CLUL1Q15846 466 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 BCRP11274 1271 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 UBLCP1Q8WVY7 318 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-202ENST00000342494 USTQ9Y2C2 406 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 MRPL11Q9Y3B7 192 aaKnown RBP16.68■□□□□ 0.26
UBE3B-202ENST00000342494 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 TBC1D31Q96DN5 1066 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 ATP5JP18859 108 aa16.68■□□□□ 0.26
UBE3B-202ENST00000342494 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms