RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 HOXB7P09629 217 aa16.94■□□□□ 0.3
COL11A2-201ENST00000341947 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
COL11A2-201ENST00000341947 IRX5P78411 483 aaPredicted RBP16.94■□□□□ 0.3
COL11A2-201ENST00000341947 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
COL11A2-201ENST00000341947 TAOK1Q7L7X3 1001 aa16.94■□□□□ 0.3
COL11A2-201ENST00000341947 USTQ9Y2C2 406 aa16.94■□□□□ 0.3
COL11A2-201ENST00000341947 GCNT3O95395 438 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 CEP57Q86XR8 500 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 SLC52A2Q9HAB3 445 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 CFBP00751 764 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 BCRP11274 1271 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 TUBB2AQ13885 445 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 GSDMBQ8TAX9 411 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 TUBB2BQ9BVA1 445 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
COL11A2-201ENST00000341947 TBC1D22AQ8WUA7 517 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 MRPL44Q9H9J2 332 aaKnown RBP16.93■□□□□ 0.3
COL11A2-201ENST00000341947 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
COL11A2-201ENST00000341947 P4HA1P13674 534 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
COL11A2-201ENST00000341947 SECISBP2LQ93073 1101 aaKnown RBP16.93■□□□□ 0.3
COL11A2-201ENST00000341947 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
COL11A2-201ENST00000341947 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 CD19P15391 556 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 SLC5A4Q9NY91 659 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 AS3MTQ9HBK9 375 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 KCNG1Q9UIX4 513 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 RLBP1P12271 317 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 G2E3Q7L622 706 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 DYMQ7RTS9 669 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 ZBTB24O43167 697 aaPredicted RBP16.92■□□□□ 0.3
COL11A2-201ENST00000341947 CABP7Q86V35 215 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
COL11A2-201ENST00000341947 NCOA5Q9HCD5 579 aaKnown RBP16.91■□□□□ 0.3
COL11A2-201ENST00000341947 RNASE9P60153 205 aaKnown RBP16.91■□□□□ 0.3
COL11A2-201ENST00000341947 CUL4BQ13620 913 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 OTUD6AQ7L8S5 288 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 ASIC3Q9UHC3 531 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 HPDP32754 393 aaPredicted RBP16.91■□□□□ 0.3
COL11A2-201ENST00000341947 EVCP57679 992 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 SYCE1Q8N0S2 351 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 HS1BP3Q53T59 392 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
COL11A2-201ENST00000341947 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
COL11A2-201ENST00000341947 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 ZBTB9Q96C00 473 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
COL11A2-201ENST00000341947 CLSTN2Q9H4D0 955 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 H7C1D1 291 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 CLCN1P35523 988 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL11A2-201ENST00000341947 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 LGSNQ5TDP6 509 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 ZNF532Q9HCE3 1301 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 CSADQ9Y600 493 aa16.9■□□□□ 0.3
COL11A2-201ENST00000341947 FANCCQ00597 558 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 A1BGP04217 495 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 GTF2A1P52655 376 aaPredicted RBP16.89■□□□□ 0.29
COL11A2-201ENST00000341947 CROCCP2Q86T23 111 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 KBTBD3Q8NAB2 608 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 NEDD9Q14511 834 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 CACYBPQ9HB71 228 aaKnown RBP16.89■□□□□ 0.29
COL11A2-201ENST00000341947 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
COL11A2-201ENST00000341947 FLOT1O75955 427 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 NLRP12P59046 1061 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 GKAP1Q5VSY0 366 aaPredicted RBP16.89■□□□□ 0.29
COL11A2-201ENST00000341947 MYL10Q9BUA6 226 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 ATP11AP98196 1134 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
COL11A2-201ENST00000341947 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
COL11A2-201ENST00000341947 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
COL11A2-201ENST00000341947 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms