RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 AGTPBP1Q9UPW5 1226 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 LOC285556D6RIA3 1793 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 ERC2O15083 957 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 RGS19P49795 217 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 PRMT2P55345 433 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 GADL1Q6ZQY3 521 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 EDC3Q96F86 508 aaKnown RBP16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 PTPN22Q9Y2R2 807 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
SIRPB3P-201ENST00000340424 SPP2Q13103 211 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 SH3D19Q5HYK7 790 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 TATDN1Q6P1N9 297 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 DDRGK1Q96HY6 314 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
SIRPB3P-201ENST00000340424 C19orf81C9J6K1 198 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 ZFYP08048 801 aaPredicted RBP16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 BACE1P56817 501 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 AMOTL1Q8IY63 956 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 LCORLQ8N3X6 602 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 DCP1AQ9NPI6 582 aaPredicted RBP16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
SIRPB3P-201ENST00000340424 CENPFP49454 3210 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 USP17L10C9JJH3 530 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 MBD4O95243 580 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 BCRP11274 1271 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 CPA4Q9UI42 421 aa16.06■□□□□ 0.16
SIRPB3P-201ENST00000340424 CYP2C8P10632 490 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 MX1P20591 662 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 OSBPP22059 807 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 HOXD10P28358 340 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 PLCD1P51178 756 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 HMGCS2P54868 508 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 GABPAQ06546 454 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 SDR42E1Q8WUS8 393 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
SIRPB3P-201ENST00000340424 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 GDF11O95390 407 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 GH2P01242 217 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 MTMR2Q13614 643 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 ABCB5Q2M3G0 1257 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 TREML2Q5T2D2 321 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 ARMC5Q96C12 935 aa16.04■□□□□ 0.16
SIRPB3P-201ENST00000340424 RNF113AO15541 343 aaKnown RBP16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 SHMT1P34896 483 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 USP14P54578 494 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 FCGRTP55899 365 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 MLLT1Q03111 559 aaPredicted RBP16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 APPBP2Q92624 585 aa16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 RWDD1Q9H446 243 aaPredicted RBP16.03■□□□□ 0.16
SIRPB3P-201ENST00000340424 GNAT2P19087 354 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 PSMC4P43686 418 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 JAG1P78504 1218 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 CAP1Q01518 475 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 FAM110CQ1W6H9 321 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 TSHZ3Q63HK5 1081 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 ARHGAP39Q9C0H5 1083 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 PUS7LQ9H0K6 701 aaKnown RBP16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 SRRDQ9UH36 339 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 SLC4A4Q9Y6R1 1079 aa16.02■□□□□ 0.16
SIRPB3P-201ENST00000340424 SALL3Q9BXA9 1300 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 IRX3P78415 501 aaPredicted RBP16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 C12orf42Q96LP6 360 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 STRBPQ96SI9 672 aaKnown RBP16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 PTCH2Q9Y6C5 1203 aa16.01■□□□□ 0.15
SIRPB3P-201ENST00000340424 PRKAB2O43741 272 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms