RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 TAOK3Q9H2K8 898 aa24.76■■□□□ 1.55
VRK2-201ENST00000340157 PRPF40AO75400 957 aaKnown RBP24.75■■□□□ 1.55
VRK2-201ENST00000340157 NT5C2P49902 561 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 GABPAQ06546 454 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 PHKBQ93100 1093 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 GDPD2Q9HCC8 539 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 ZNRF3Q9ULT6 936 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 CNPY2Q9Y2B0 182 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 KIF3AQ9Y496 699 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 MYH6P13533 1939 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 PTMSP20962 102 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 RBM5P52756 815 aaKnown RBP eCLIP24.75■■□□□ 1.55
VRK2-201ENST00000340157 CACNB3P54284 484 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 TROAPQ12815 778 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 RESTQ13127 1097 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 RTN1Q16799 776 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 ZFPM1Q8IX07 1006 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 NIM1KQ8IY84 436 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 BCS1LQ9Y276 419 aa24.75■■□□□ 1.55
VRK2-201ENST00000340157 DNM1Q05193 864 aaKnown RBP24.74■■□□□ 1.55
VRK2-201ENST00000340157 FAM173BQ6P4H8 233 aa24.74■■□□□ 1.55
VRK2-201ENST00000340157 FANCBQ8NB91 859 aa24.74■■□□□ 1.55
VRK2-201ENST00000340157 NUP133Q8WUM0 1156 aa24.74■■□□□ 1.55
VRK2-201ENST00000340157 ATP6V1DQ9Y5K8 247 aa24.74■■□□□ 1.55
VRK2-201ENST00000340157 MYO3BQ8WXR4 1341 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 UBE2Q2LH0YL09 131 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 H3BQV1 296 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 CFAP100Q494V2 611 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 IFFO2Q5TF58 517 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 FAM198AQ9UFP1 575 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 UTRNP46939 3433 aa24.73■■□□□ 1.55
VRK2-201ENST00000340157 CDKL5O76039 1030 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 AIFM3Q96NN9 605 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 IDI2Q9BXS1 227 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 GJB4Q9NTQ9 266 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 TCP11L1Q9NUJ3 509 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 ZBTB12Q9Y330 459 aaPredicted RBP24.72■■□□□ 1.55
VRK2-201ENST00000340157 IFNAR1P17181 557 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 GUCY1B3Q02153 619 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 NBPF11Q86T75 865 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 ZNF444Q8N0Y2 327 aaPredicted RBP24.72■■□□□ 1.55
VRK2-201ENST00000340157 ANKS1AQ92625 1134 aa24.72■■□□□ 1.55
VRK2-201ENST00000340157 PRMT6Q96LA8 375 aaPredicted RBP24.72■■□□□ 1.55
VRK2-201ENST00000340157 TSPY3P0CV98 308 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 TSPY8P0CW00 308 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 CXCL9Q07325 125 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 OTUD7BQ6GQQ9 843 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 CPLX2Q6PUV4 134 aaKnown RBP24.71■■□□□ 1.55
VRK2-201ENST00000340157 CATIPQ7Z7H3 387 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 TTC6Q86TZ1 520 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 STK36Q9NRP7 1315 aa24.71■■□□□ 1.55
VRK2-201ENST00000340157 DDAH1O94760 285 aa24.7■■□□□ 1.55
VRK2-201ENST00000340157 CMTR1Q8N1G2 835 aaKnown RBP24.7■■□□□ 1.55
VRK2-201ENST00000340157 TMEM87AQ8NBN3 555 aa24.7■■□□□ 1.55
VRK2-201ENST00000340157 TDRD3Q9H7E2 651 aaKnown RBP24.7■■□□□ 1.55
VRK2-201ENST00000340157 ZNF287Q9HBT7 754 aa24.7■■□□□ 1.55
VRK2-201ENST00000340157 GREB1LQ9C091 1923 aaPredicted RBP24.7■■□□□ 1.54
VRK2-201ENST00000340157 FMNL1O95466 1100 aaPredicted RBP24.7■■□□□ 1.54
VRK2-201ENST00000340157 PRELPP51888 382 aa24.7■■□□□ 1.54
VRK2-201ENST00000340157 USP48Q86UV5 1035 aa24.7■■□□□ 1.54
VRK2-201ENST00000340157 DGKHQ86XP1 1220 aa24.7■■□□□ 1.54
VRK2-201ENST00000340157 SLURP2P0DP57 97 aa24.69■■□□□ 1.54
VRK2-201ENST00000340157 FBXO18Q8NFZ0 1043 aa24.69■■□□□ 1.54
VRK2-201ENST00000340157 GPT2Q8TD30 523 aa24.69■■□□□ 1.54
VRK2-201ENST00000340157 C8orf76Q96K31 380 aa24.69■■□□□ 1.54
VRK2-201ENST00000340157 LTBP3Q9NS15 1303 aa24.69■■□□□ 1.54
VRK2-201ENST00000340157 NPM3O75607 178 aaKnown RBP24.68■■□□□ 1.54
VRK2-201ENST00000340157 FUT2Q10981 343 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 TCP10Q12799 353 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 SKOR2Q2VWA4 1001 aaPredicted RBP24.68■■□□□ 1.54
VRK2-201ENST00000340157 SH3BP5LQ7L8J4 393 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 CRACR2BQ8N4Y2 399 aaPredicted RBP24.68■■□□□ 1.54
VRK2-201ENST00000340157 NEDD1Q8NHV4 660 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.68■■□□□ 1.54
VRK2-201ENST00000340157 SLC26A6Q9BXS9 759 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 SERPINB13Q9UIV8 391 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 CCDC196A0A1B0GTZ2 297 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 GUCY1A2P33402 732 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 RASSF7Q02833 373 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 KLHL40Q2TBA0 621 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 ALG1Q9BT22 464 aa24.68■■□□□ 1.54
VRK2-201ENST00000340157 PLIN4Q96Q06 1357 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 DDTLA6NHG4 134 aaPredicted RBP24.67■■□□□ 1.54
VRK2-201ENST00000340157 SPDYE2BA6NHP3 402 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 SPDYE6P0CI01 402 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 SSRP1Q08945 709 aaKnown RBP24.67■■□□□ 1.54
VRK2-201ENST00000340157 PPP2R5BQ15173 497 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 CCDC82Q8N4S0 544 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 ZSCAN16Q9H4T2 348 aaPredicted RBP24.67■■□□□ 1.54
VRK2-201ENST00000340157 DNAJC18Q9H819 358 aa24.67■■□□□ 1.54
VRK2-201ENST00000340157 DDX49Q9Y6V7 483 aaKnown RBP24.67■■□□□ 1.54
VRK2-201ENST00000340157 FIBPO43427 364 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 GADD45BO75293 160 aaPredicted RBP24.66■■□□□ 1.54
VRK2-201ENST00000340157 PLEKHA8P1O95397 391 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 CALM1P0DP23 149 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 CALM2P0DP24 149 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 CALM3P0DP25 149 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 NCLP19338 710 aaKnown RBP24.66■■□□□ 1.54
VRK2-201ENST00000340157 SHMT1P34896 483 aa24.66■■□□□ 1.54
VRK2-201ENST00000340157 AGBL3Q8NEM8 1001 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms