RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-201ENST00000340026 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP2-201ENST00000340026 PYCARDQ9ULZ3 195 aa12.35□□□□□ -0.43
TRAF3IP2-201ENST00000340026 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 PKN1Q16512 942 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 MAP7D2Q96T17 732 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 GNPATO15228 680 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 ZRSR1Q15695 479 aaKnown RBP12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
TRAF3IP2-201ENST00000340026 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 USP21Q9UK80 565 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KCNH3Q9ULD8 1083 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 BTBD18B2RXH4 712 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TNFRSF25Q93038 417 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 XDHP47989 1333 aa12.33□□□□□ -0.44
TRAF3IP2-201ENST00000340026 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 A0A0G2JS52 829 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 GSTO1P78417 241 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 RRP12Q5JTH9 1297 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SRP68Q9UHB9 627 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 MINDY4BA8MYZ0 360 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PDE4BQ07343 736 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SH3GLB2Q9NR46 395 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
TRAF3IP2-201ENST00000340026 UQCRHLA0A096LP55 91 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 UQCRHP07919 91 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 MARCKSP29966 332 aaPredicted RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TRAPPC3LQ5T215 181 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 METTL16Q86W50 562 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CACTINQ8WUQ7 758 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 QSER1Q2KHR3 1735 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 USP17L21D6R901 530 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KRT2P35908 639 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TUBB4AP04350 444 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KLRK1P26718 216 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NPY5RQ15761 445 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 IQSEC3Q9UPP2 1182 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 MYL5Q02045 173 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SYCP1Q15431 976 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 TMC4Q7Z404 712 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 NRBP1Q9UHY1 535 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 WTIPA6NIX2 430 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 CBFA2T2O43439 604 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 RFC4P35249 363 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
TRAF3IP2-201ENST00000340026 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms