RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 HIBADHP31937 336 aaKnown RBP15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SART3Q15020 963 aaKnown RBP15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TMTC2Q8N394 836 aa15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ESR2Q92731 530 aa15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ZSCAN10Q96SZ4 725 aaPredicted RBP15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SDF4Q9BRK5 362 aa15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TAOK2Q9UL54 1235 aa15□□□□□ -0.01
CDK5RAP1-201ENST00000339269 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 USP17L21D6R901 530 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 PRDM1O75626 825 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 DEXIO95424 95 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CYP2D6P10635 497 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 GRIN1Q05586 938 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NR5A1Q13285 461 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NCAPHQ15003 741 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CCDC82Q8N4S0 544 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TIGD1Q96MW7 591 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TUBE1Q9UJT0 475 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 PLEKHA8P1O95397 391 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TROAPQ12815 778 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NFIXQ14938 502 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TPTE2Q6XPS3 522 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CEP57L1Q8IYX8 460 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CACTINQ8WUQ7 758 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 UBAC1Q9BSL1 405 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 HSD3B7Q9H2F3 369 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FOXP1Q9H334 677 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FBXO2Q9UK22 296 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 LAMB1P07942 1786 aa14.99□□□□□ -0.01
CDK5RAP1-201ENST00000339269 MYH13Q9UKX3 1938 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ORC4O43929 436 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SLC3A2P08195 630 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NLRP12P59046 1061 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TRIM29Q14134 588 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NPY5RQ15761 445 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 GRIK5Q16478 980 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 WASF1Q92558 559 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 AATFQ9NY61 560 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 JAG2Q9Y219 1238 aa14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ERICH2A1L162 156 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FAM205CA6NFA0 338 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CUTAO60888 179 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CHAF1AQ13111 956 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 ARID5BQ14865 1188 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 EARS2Q5JPH6 523 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 METTL16Q86W50 562 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 FOXP4Q8IVH2 680 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 RNF26Q9BY78 433 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CLIP2Q9UDT6 1046 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 MKRN1Q9UHC7 482 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 BIN1O00499 593 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 NMT2O60551 498 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 PTPREP23469 700 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SYKP43405 635 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TRIM22Q8IYM9 498 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 MTFR1LQ9H019 292 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 PCDHB6Q9Y5E3 794 aa14.97□□□□□ -0.01
CDK5RAP1-201ENST00000339269 UQCRHLA0A096LP55 91 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 CCDC196A0A1B0GTZ2 297 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 GOLGA6L19H0YKK7 550 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 WNT7AO00755 349 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 UQCRHP07919 91 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 LONRF3Q496Y0 759 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SBK1Q52WX2 424 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 JMYQ8N9B5 988 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SLC16A10Q8TF71 515 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 TNFRSF25Q93038 417 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 SPON1Q9HCB6 807 aa14.96□□□□□ -0.01
CDK5RAP1-201ENST00000339269 hCG_1642624A0A1W2PR95 340 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 ADRA2BP18089 450 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 RFC4P35249 363 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GRAPQ13588 217 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GNL2Q13823 731 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 MSL1Q68DK7 614 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 TMTC3Q6ZXV5 915 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PHF20Q9BVI0 1012 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 FOXN1O15353 648 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PRPF3O43395 683 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 BMP6P22004 513 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PNOCQ13519 176 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 PPP2R5BQ15173 497 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 NOM1Q5C9Z4 860 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 SPECC1Q5M775 1068 aa14.95□□□□□ -0.02
CDK5RAP1-201ENST00000339269 IFIT1BQ5T764 474 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms