RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MARCH10Q8NA82 808 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 MRVI1Q9Y6F6 885 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 CARMIL3Q8ND23 1372 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PDE4DQ08499 809 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 JAKMIP3Q5VZ66 844 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 WWC2Q6AWC2 1192 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 VPS16Q9H269 839 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 MMP1P03956 469 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 CBX1P83916 185 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 TUBB4AP04350 444 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 TRIM21P19474 475 aaKnown RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 TMEM87AQ8NBN3 555 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 JDP2Q8WYK2 163 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 MMRN2Q9H8L6 949 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 POLR3EQ9NVU0 708 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 SLU7O95391 586 aaKnown RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 ZNF827Q17R98 1081 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 KRBA2Q6ZNG9 492 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 VEZTQ9HBM0 779 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 GJB4Q9NTQ9 266 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PCP11498 1178 aaKnown RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 SEPT12Q8IYM1 358 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 BLIDQ8IZY5 108 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PLA2G12BQ9BX93 195 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 CGNQ9P2M7 1197 aaKnown RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 NARFQ9UHQ1 456 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PRDX5P30044 214 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 ENOX2Q16206 610 aaKnown RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 ODF2Q5BJF6 829 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 TEKT1Q969V4 418 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 MB21D2Q8IYB1 491 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PPP6R2O75170 966 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 BBOX1O75936 387 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 GOLGA8HP0CJ92 632 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 BTDP43251 543 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 IMPACTQ9P2X3 320 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 PCDHA5Q9Y5H7 936 aa7.12□□□□□ -1.27
PRKDC-202ENST00000338368 TNNT3P45378 269 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 STK32BQ9NY57 414 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 USP32Q8NFA0 1604 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 GRAPQ13588 217 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 RBM26Q5T8P6 1007 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 ERMNQ8TAM6 284 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 GRAPLQ8TC17 118 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 TAF4BQ92750 862 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 LZTS2Q9BRK4 669 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 KLRF2D3W0D1 207 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 INCENPQ9NQS7 918 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 MAPK8IP1Q9UQF2 711 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 SMCO2A6NFE2 343 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 ZNF500O60304 480 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 DDAH1O94760 285 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 POSTNQ15063 836 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 SV2BQ7L1I2 683 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 NFE2L3Q9Y4A8 694 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 RBM6P78332 1123 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 KIAA0825Q8IV33 1275 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 XPO4Q9C0E2 1151 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 MRFAP1L1Q96HT8 127 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 BAG1Q99933 345 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 GTPBP4Q9BZE4 634 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 NCOA3Q9Y6Q9 1424 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 CYLC1P35663 651 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 PPP1R2P41236 205 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 TCP10Q12799 353 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 DIXDC1Q155Q3 683 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 DDIT3P35638 169 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 TDRD7Q8NHU6 1098 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 TMEM132AQ24JP5 1023 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 SYT10Q6XYQ8 523 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 FLAD1Q8NFF5 587 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 COL15A1P39059 1388 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 ABCC12Q96J65 1359 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 SMIM5Q71RC9 77 aa7.11□□□□□ -1.27
PRKDC-202ENST00000338368 FAM84BQ96KN1 310 aaPredicted RBP7.11□□□□□ -1.27
PRKDC-202ENST00000338368 CCNT1O60563 726 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 PDE6BP35913 854 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 BRIP1Q9BX63 1249 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 FOXP1Q9H334 677 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SEPT11Q9NVA2 429 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 CPDO75976 1380 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 MST1RQ04912 1400 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 AKR1B10O60218 316 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 IQCEQ6IPM2 695 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 CYB5R4Q7L1T6 521 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SLIT1O75093 1534 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 UBXN1Q04323 297 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 PREX1Q8TCU6 1659 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 TBCAO75347 108 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 CCDC175P0C221 793 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 MECOMQ03112 1051 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 NR5A1Q13285 461 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 CABP7Q86V35 215 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms