RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 DDX17Q92841 729 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 BLZF1Q9H2G9 400 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 RBM28Q9NW13 759 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 CTDSPL2Q05D32 466 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 DTHD1Q6ZMT9 781 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 PPANQ9NQ55 473 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 ZCCHC11Q5TAX3 1644 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 YY1P25490 414 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 BEND3Q5T5X7 828 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 PIK3AP1Q6ZUJ8 805 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 CCDC26Q8TAB7 109 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 PLVAPQ9BX97 442 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 MTIF3Q9H2K0 278 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 C6orf50Q9HD87 102 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 DDX21Q9NR30 783 aaKnown RBP eCLIP9.54□□□□□ -0.88
CPM-201ENST00000338356 AGTPBP1Q9UPW5 1226 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 LUC7L2Q9Y383 392 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 BLMP54132 1417 aaPredicted RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 RNMTO43148 476 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 SMARCC2Q8TAQ2 1214 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 FAM227BQ96M60 508 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 GDAP1L1Q96MZ0 367 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 SH3TC1Q8TE82 1336 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 GOLGA6BA6NDN3 693 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 ZFYP08048 801 aaPredicted RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 ADKP55263 362 aaKnown RBP9.54□□□□□ -0.88
CPM-201ENST00000338356 FYB2Q5VWT5 728 aa9.54□□□□□ -0.88
CPM-201ENST00000338356 FAM173BQ6P4H8 233 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 HELLSQ9NRZ9 838 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 TBC1D7Q9P0N9 293 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 PABPN1LA6NDY0 278 aaKnown RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 ATP5DP30049 168 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 EN1Q05925 392 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 NELFBQ8WX92 580 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 IMPACTQ9P2X3 320 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 ZBTB7AO95365 584 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 PDE4DQ08499 809 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 LMBR1LQ6UX01 489 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 PPP1R21Q6ZMI0 780 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 TAB2Q9NYJ8 693 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 TTF2Q9UNY4 1162 aaKnown RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 B4E1Z4 1266 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 GNAQP50148 359 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 IFT20Q8IY31 132 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 TMTC2Q8N394 836 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 ARHGEF2Q92974 986 aaKnown RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 NDUFAB1O14561 156 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 VAMP4O75379 141 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 ANO1Q5XXA6 986 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
CPM-201ENST00000338356 CEP120Q8N960 986 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 LRRC45Q96CN5 670 aa9.53□□□□□ -0.88
CPM-201ENST00000338356 NBPF7P0C2Y1 421 aaPredicted RBP9.52□□□□□ -0.88
CPM-201ENST00000338356 EPB41P11171 864 aaKnown RBP9.52□□□□□ -0.88
CPM-201ENST00000338356 TUBB4BP68371 445 aa9.52□□□□□ -0.88
CPM-201ENST00000338356 SARNPP82979 210 aaKnown RBP9.52□□□□□ -0.88
CPM-201ENST00000338356 KSR2Q6VAB6 950 aa9.52□□□□□ -0.88
CPM-201ENST00000338356 LEO1Q8WVC0 666 aaPredicted RBP9.52□□□□□ -0.88
CPM-201ENST00000338356 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.88
CPM-201ENST00000338356 PNMA3Q9UL41 463 aa9.52□□□□□ -0.88
CPM-201ENST00000338356 SEC31AO94979 1220 aaKnown RBP9.52□□□□□ -0.89
CPM-201ENST00000338356 GNAT2P19087 354 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 GUCY2FP51841 1108 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 PAK1Q13153 545 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 TRIM14Q14142 442 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 SBNO1A3KN83 1393 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 ZFYVE9O95405 1425 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 HIBADHP31937 336 aaKnown RBP9.52□□□□□ -0.89
CPM-201ENST00000338356 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 RAB3IL1Q8TBN0 382 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 SOS1Q07889 1333 aaPredicted RBP9.52□□□□□ -0.89
CPM-201ENST00000338356 PDE8AO60658 829 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 ZWINTO95229 277 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 LMNTD2Q8IXW0 634 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 TMEM63CQ9P1W3 806 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 CALUO43852 315 aaPredicted RBP9.52□□□□□ -0.89
CPM-201ENST00000338356 UBXN2AP68543 259 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 SEPT6Q14141 434 aa9.52□□□□□ -0.89
CPM-201ENST00000338356 CHMP2AO43633 222 aa9.51□□□□□ -0.89
CPM-201ENST00000338356 FMNL1O95466 1100 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms