RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
CSMD2-202ENST00000338325 C19orf81C9J6K1 198 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 GNAI2P04899 355 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 XRCC5P13010 732 aaKnown RBP14.12□□□□□ -0.15
CSMD2-202ENST00000338325 SYN1P17600 705 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
CSMD2-202ENST00000338325 CRACR2BQ8N4Y2 399 aaPredicted RBP14.12□□□□□ -0.15
CSMD2-202ENST00000338325 GPRC5AQ8NFJ5 357 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 TRIM34Q9BYJ4 488 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 DNAJC18Q9H819 358 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 TXNRD2Q9NNW7 524 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 FLT1P17948 1338 aa14.12□□□□□ -0.15
CSMD2-202ENST00000338325 PNMA6EA0A0J9YXQ4 647 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 USP17L10C9JJH3 530 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 PEX10O60683 326 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
CSMD2-202ENST00000338325 MAPK4P31152 587 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
CSMD2-202ENST00000338325 PPP4CP60510 307 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 JAG1P78504 1218 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 TTC39AQ5SRH9 613 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
CSMD2-202ENST00000338325 MAPKAPK5Q8IW41 473 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 TDHQ8IZJ6 230 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 GTF3C2Q8WUA4 911 aaPredicted RBP14.11□□□□□ -0.15
CSMD2-202ENST00000338325 TGFBRAP1Q8WUH2 860 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 PFASO15067 1338 aa14.11□□□□□ -0.15
CSMD2-202ENST00000338325 GDF11O95390 407 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 ERVK-24P63145 666 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
CSMD2-202ENST00000338325 LRIT3Q3SXY7 679 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 FOXP4Q8IVH2 680 aaPredicted RBP14.1□□□□□ -0.15
CSMD2-202ENST00000338325 DEFB123Q8N688 67 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 RBPJLQ9UBG7 517 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 TRIM27P14373 513 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 RGS2P41220 211 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 CACNB2Q08289 660 aaPredicted RBP14.1□□□□□ -0.15
CSMD2-202ENST00000338325 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 CCAR1Q8IX12 1150 aaKnown RBP14.1□□□□□ -0.15
CSMD2-202ENST00000338325 USP6NLQ92738 828 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 GPR108Q9NPR9 543 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
CSMD2-202ENST00000338325 IPO8O15397 1037 aaKnown RBP14.09□□□□□ -0.15
CSMD2-202ENST00000338325 HLA-DOAP06340 250 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 COL6A1P12109 1028 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 MORN1Q5T089 497 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 GPR142Q7Z601 462 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 APBA2Q99767 749 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 PAGR1Q9BTK6 254 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 UBE2OQ9C0C9 1292 aaKnown RBP14.09□□□□□ -0.15
CSMD2-202ENST00000338325 PORCNQ9H237 461 aa14.09□□□□□ -0.15
CSMD2-202ENST00000338325 IGSF3O75054 1194 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 CYP2E1P05181 493 aaPredicted RBP14.08□□□□□ -0.16
CSMD2-202ENST00000338325 CCND3P30281 292 aaPredicted RBP14.08□□□□□ -0.16
CSMD2-202ENST00000338325 CCL14Q16627 93 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 Q3C1V9 767 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 TNNI3KQ59H18 835 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 Q7L0L9 218 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 PLEKHH3Q7Z736 793 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 DBNDD2Q9BQY9 259 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 SAP30BPQ9UHR5 308 aaKnown RBP14.08□□□□□ -0.16
CSMD2-202ENST00000338325 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 FPGT-TNNI3KV9GXZ4 949 aa14.08□□□□□ -0.16
CSMD2-202ENST00000338325 LHX8Q68G74 356 aa14.07□□□□□ -0.16
CSMD2-202ENST00000338325 ZNF512BQ96KM6 892 aaPredicted RBP14.07□□□□□ -0.16
CSMD2-202ENST00000338325 CWC22Q9HCG8 908 aaKnown RBP14.07□□□□□ -0.16
CSMD2-202ENST00000338325 STXBP5LQ9Y2K9 1186 aa14.07□□□□□ -0.16
CSMD2-202ENST00000338325 DYNLL1P63167 89 aaKnown RBP14.06□□□□□ -0.16
CSMD2-202ENST00000338325 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
CSMD2-202ENST00000338325 POLA2Q14181 598 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 POTEEQ6S8J3 1075 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
CSMD2-202ENST00000338325 C12orf42Q96LP6 360 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 RABGAP1Q9Y3P9 1069 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 NAV1Q8NEY1 1877 aa14.06□□□□□ -0.16
CSMD2-202ENST00000338325 GH2P01242 217 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 ZAP70P43403 619 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 CCNA1P78396 465 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 MAP2K5Q13163 448 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 CLUAP1Q96AJ1 413 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 FEZ1Q99689 392 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 PIH1D3Q9NQM4 214 aaKnown RBP14.05□□□□□ -0.16
CSMD2-202ENST00000338325 MTMR10Q9NXD2 777 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 LTBP2Q14767 1821 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L15C9J2P7 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L13C9JLJ4 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L11C9JVI0 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L18D6R9N7 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L22D6RA61 530 aa14.05□□□□□ -0.16
CSMD2-202ENST00000338325 USP17L17D6RBQ6 530 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms