RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 DNAJC10Q8IXB1 793 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
RBM39-202ENST00000338163 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 LAMA4Q16363 1823 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 NOP2P46087 812 aaKnown RBP13.46□□□□□ -0.25
RBM39-202ENST00000338163 GRIN1Q05586 938 aa13.46□□□□□ -0.25
RBM39-202ENST00000338163 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
RBM39-202ENST00000338163 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
RBM39-202ENST00000338163 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.25
RBM39-202ENST00000338163 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
RBM39-202ENST00000338163 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
RBM39-202ENST00000338163 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
RBM39-202ENST00000338163 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.25
RBM39-202ENST00000338163 RBL2Q08999 1139 aa13.46□□□□□ -0.26
RBM39-202ENST00000338163 SLC35F6Q8N357 371 aa13.46□□□□□ -0.26
RBM39-202ENST00000338163 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.26
RBM39-202ENST00000338163 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.26
RBM39-202ENST00000338163 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.26
RBM39-202ENST00000338163 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.26
RBM39-202ENST00000338163 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.26
RBM39-202ENST00000338163 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 SIK1P57059 783 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 PI16Q6UXB8 463 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 GDAP1L1Q96MZ0 367 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 PUS7LQ9H0K6 701 aaKnown RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 MYO1BO43795 1136 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 IARSP41252 1262 aaKnown RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 SLC9C2Q5TAH2 1124 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 ACRBPQ8NEB7 543 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 SMARCC1Q92922 1105 aaPredicted RBP13.45□□□□□ -0.26
RBM39-202ENST00000338163 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 DACH1Q9UI36 760 aa13.45□□□□□ -0.26
RBM39-202ENST00000338163 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 FOXP2O15409 715 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 COBLO75128 1261 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 CDKL5O76039 1030 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 ABL1P00519 1130 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 A1BGP04217 495 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 ZNF18P17022 549 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
RBM39-202ENST00000338163 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
RBM39-202ENST00000338163 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 MLKLQ8NB16 471 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 ITGB4P16144 1822 aa13.44□□□□□ -0.26
RBM39-202ENST00000338163 GPAA1O43292 621 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 CASP14P31944 242 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 ICE2Q659A1 982 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 NCAPH2Q6IBW4 605 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 HNRNPLLQ8WVV9 542 aaKnown RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 DRC1Q96MC2 740 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 ZMYM6O95789 1325 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 BTBD18B2RXH4 712 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 B4E1Z4 1266 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 ADORA1P30542 326 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 AFMP43652 599 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 KCNJ14Q9UNX9 436 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 LRRIQ3A6PVS8 624 aaPredicted RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 STARD3NLO95772 234 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 CASP1P29466 404 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 CCT6AP40227 531 aaKnown RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 MAGEA9P43362 315 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 APOA5Q6Q788 366 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 SMYD4Q8IYR2 804 aaPredicted RBP13.43□□□□□ -0.26
RBM39-202ENST00000338163 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
RBM39-202ENST00000338163 GOLGA8AA7E2F4 631 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 SCARF1Q14162 830 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 NR1I3Q14994 352 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 PANX2Q96RD6 677 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 MED15Q96RN5 788 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
RBM39-202ENST00000338163 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 RAB21Q9UL25 225 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 EYA2O00167 538 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 ZBTB43O43298 467 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 RNF40O75150 1001 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 ZAP70P43403 619 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 USP5P45974 858 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms