RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 DYMQ7RTS9 669 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 IFT20Q8IY31 132 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 CFAP65Q6ZU64 1925 aaKnown RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 GOLGA6BA6NDN3 693 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 B4GALNT4Q76KP1 1039 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 KRT25Q7Z3Z0 450 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 GPR161Q8N6U8 529 aaKnown RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 NAP1L3Q99457 506 aaPredicted RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.35■□□□□ 0.05
RTN4-202ENST00000337526 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
RTN4-202ENST00000337526 MXRA7P84157 204 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 FANCLQ9NW38 375 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 ABCA8O94911 1581 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 TNFAIP3P21580 790 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 HAUS3Q68CZ6 603 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 DESI2Q9BSY9 194 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 PYCARDQ9ULZ3 195 aa15.35■□□□□ 0.05
RTN4-202ENST00000337526 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 MROH5Q6ZUA9 1318 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 OR8K1Q8NGG5 319 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 COPRSQ9NQ92 184 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 BTBD18B2RXH4 712 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
RTN4-202ENST00000337526 NDUFA8P51970 172 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 TSNARE1Q96NA8 513 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 SPOPO43791 374 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 ZNF827Q17R98 1081 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 SEL1L2Q5TEA6 688 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
RTN4-202ENST00000337526 A6NNZ2 444 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 GNPATO15228 680 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.05
RTN4-202ENST00000337526 TFAP4Q01664 338 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.05
RTN4-202ENST00000337526 WDR66Q8TBY9 1149 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 CEP63Q96MT8 703 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 TFCP2L1Q9NZI6 479 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 GCC2Q8IWJ2 1684 aa15.33■□□□□ 0.05
RTN4-202ENST00000337526 SCRN1Q12765 414 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.043e-12■■■■□ 21.6
RTN4-202ENST00000337526 ASIC2Q16515 512 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 LRRC45Q96CN5 670 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 RABEP2Q9H5N1 569 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 FAM207AQ9NSI2 230 aaPredicted RBP15.33■□□□□ 0.04
RTN4-202ENST00000337526 SAR1BQ9Y6B6 198 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 CEP104O60308 925 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 CABP7Q86V35 215 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 FANCBQ8NB91 859 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 SERPINA10Q9UK55 444 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 ZFYVE16Q7Z3T8 1539 aa15.33■□□□□ 0.04
RTN4-202ENST00000337526 USP17L12C9JPN9 530 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 USP17L21D6R901 530 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 PDE6AP16499 860 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 PPP2R2CQ9Y2T4 447 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 UFL1O94874 794 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 CYP21A2P08686 494 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 KLHL30Q0D2K2 578 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 TTLL7Q6ZT98 887 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 IFNL3Q8IZI9 196 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 GDAP1L1Q96MZ0 367 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 MPHOSPH6Q99547 160 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 TRIM31Q9BZY9 425 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 PPARAQ07869 468 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 TDRD7Q8NHU6 1098 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 IFIH1Q9BYX4 1025 aaKnown RBP15.32■□□□□ 0.04
RTN4-202ENST00000337526 CEP83Q9Y592 693 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 CFAP221Q4G0U5 840 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 KIAA1524Q8TCG1 905 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 GLT8D2Q9H1C3 349 aa15.32■□□□□ 0.04
RTN4-202ENST00000337526 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 BRD3Q15059 726 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 CNBD1Q8NA66 436 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 SMC6Q96SB8 1091 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 NKIRAS1Q9NYS0 192 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 A0A1W2PQ27 194 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 A0A1W2PQ64 194 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 PPFIA1Q13136 1202 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 SETDB1Q15047 1291 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 KLHL7Q8IXQ5 586 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms