RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
SEC13-201ENST00000337354 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
SEC13-201ENST00000337354 CTDSPL2Q05D32 466 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 PPATQ06203 517 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 AKNAD1Q5T1N1 836 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 SLC44A5Q8NCS7 719 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 STAG1Q8WVM7 1258 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 CLMNQ96JQ2 1002 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
SEC13-201ENST00000337354 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
SEC13-201ENST00000337354 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 ORC4O43929 436 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 PTPRAP18433 802 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 HAND2P61296 217 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
SEC13-201ENST00000337354 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 RNF20Q5VTR2 975 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 ELP3Q9H9T3 547 aa18.23■□□□□ 0.51
SEC13-201ENST00000337354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
SEC13-201ENST00000337354 AOC2O75106 756 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 CYP21A2P08686 494 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 ZBTB48P10074 688 aaPredicted RBP18.22■□□□□ 0.51
SEC13-201ENST00000337354 RASA1P20936 1047 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 STK11IPQ8N1F8 1099 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 ZBTB21Q9ULJ3 1066 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 FOCADQ5VW36 1801 aa18.22■□□□□ 0.51
SEC13-201ENST00000337354 USP17L5A8MUK1 530 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 GDF11O95390 407 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 GH2P01242 217 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 SLC10A3P09131 477 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 OPTNQ96CV9 577 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 AS3MTQ9HBK9 375 aa18.21■□□□□ 0.51
SEC13-201ENST00000337354 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
SEC13-201ENST00000337354 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
SEC13-201ENST00000337354 PRDM1O75626 825 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 NOGQ13253 232 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 SPRYD7Q5W111 196 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 RASAL3Q86YV0 1011 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 KANSL2Q9H9L4 492 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 ZHX2Q9Y6X8 837 aa18.2■□□□□ 0.5
SEC13-201ENST00000337354 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
SEC13-201ENST00000337354 FAM155AB1AL88 458 aaPredicted RBP18.19■□□□□ 0.5
SEC13-201ENST00000337354 CXCL11O14625 94 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TSPY3P0CV98 308 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TSPY8P0CW00 308 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 AKR1B1P15121 316 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
SEC13-201ENST00000337354 JAG1P78504 1218 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TRDNQ13061 729 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 REM2Q8IYK8 340 aaPredicted RBP18.19■□□□□ 0.5
SEC13-201ENST00000337354 NEDD1Q8NHV4 660 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 ESR2Q92731 530 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 OTUD5Q96G74 571 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 WNK4Q96J92 1243 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 USP26Q9BXU7 913 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 KRT23Q9C075 422 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
SEC13-201ENST00000337354 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 SLC27A2O14975 620 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
SEC13-201ENST00000337354 MAP2K2P36507 400 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 INHBEP58166 350 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 TFAP4Q01664 338 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 TSGA10IPQ3SY00 556 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 INCENPQ9NQS7 918 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 AFG3L2Q9Y4W6 797 aa18.18■□□□□ 0.5
SEC13-201ENST00000337354 IRF6O14896 467 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 HSPA4P34932 840 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
SEC13-201ENST00000337354 SEPT2Q15019 361 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 TACC3Q9Y6A5 838 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
SEC13-201ENST00000337354 E7EWF7 191 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 MCCP23508 829 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 GTF2A2P52657 109 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 SNAPC2Q13487 334 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 KRT32Q14532 448 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
SEC13-201ENST00000337354 NCOA7Q8NI08 942 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 KCNB2Q92953 911 aa18.17■□□□□ 0.5
SEC13-201ENST00000337354 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms