RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 CTNNBL1Q8WYA6 563 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 CCDC43Q96MW1 224 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 NSRP1Q9H0G5 558 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 GPHNQ9NQX3 736 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 A0A1W2PQ27 194 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 A0A1W2PQ64 194 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 A0A1W2PQD8 194 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 IKBKBO14920 756 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 LACTBP83111 547 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 KSR1Q8IVT5 923 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 SPAG5Q96R06 1193 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 KIAA0753Q2KHM9 967 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 CACNA2D3Q8IZS8 1091 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 KCNK9Q9NPC2 374 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 SPATS2LQ9NUQ6 558 aaKnown RBP14.82□□□□□ -0.04
COL2A1-201ENST00000337299 SERPINA10Q9UK55 444 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 PRDM15P57071 1507 aaPredicted RBP14.82□□□□□ -0.04
COL2A1-201ENST00000337299 EXOC5O00471 708 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
COL2A1-201ENST00000337299 CCDC155Q8N6L0 562 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 NGLY1Q96IV0 654 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 GOLGA8KD6RF30 607 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 MAGEA1P43355 309 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 TOB2Q14106 344 aaPredicted RBP14.82□□□□□ -0.04
COL2A1-201ENST00000337299 FOXR1Q6PIV2 292 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 CCDC50Q8IVM0 306 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 FAM114A1Q8IWE2 563 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 OR8K1Q8NGG5 319 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 AIFM3Q96NN9 605 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 NEO1Q92859 1461 aa14.82□□□□□ -0.04
COL2A1-201ENST00000337299 KRT13P13646 458 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 BRD2P25440 801 aaKnown RBP14.81□□□□□ -0.04
COL2A1-201ENST00000337299 USP5P45974 858 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 TYW1BQ6NUM6 668 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 TSG101Q99816 390 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 TCP11L1Q9NUJ3 509 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 TNNC1P63316 161 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 PAK2Q13177 524 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 IFIT5Q13325 482 aaKnown RBP14.81□□□□□ -0.04
COL2A1-201ENST00000337299 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 PAK1Q13153 545 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 IQCA1Q86XH1 822 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 IP6K1Q92551 441 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 PARP3Q9Y6F1 533 aa14.81□□□□□ -0.04
COL2A1-201ENST00000337299 A6NNZ2 444 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 H3BQF6 201 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 CHUKO15111 745 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 TUBB8Q3ZCM7 444 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 KBTBD3Q8NAB2 608 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 NOC4LQ9BVI4 516 aaKnown RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 MYO5CQ9NQX4 1742 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 BTBD18B2RXH4 712 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 GUCY2DQ02846 1103 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 HIBCHQ6NVY1 386 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 PPP1R12BO60237 982 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 PACS2Q86VP3 889 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 TRIM6Q9C030 488 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 FAM207AQ9NSI2 230 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 GEMIN8Q9NWZ8 242 aaKnown RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 CCDC160A6NGH7 325 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 MAP3K12Q12852 859 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 L2HGDHQ9H9P8 463 aa14.8□□□□□ -0.04
COL2A1-201ENST00000337299 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 IQSEC3Q9UPP2 1182 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-201ENST00000337299 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 CSGALNACT2Q8N6G5 542 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 UHMK1Q8TAS1 419 aaKnown RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 IFIH1Q9BYX4 1025 aaKnown RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 BUB1O43683 1085 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 NNTQ13423 1086 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 CNPY4Q8N129 248 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 MGARPQ8TDB4 240 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 NELFBQ8WX92 580 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 SELENOOQ9BVL4 669 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 FUT8Q9BYC5 575 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 RBM28Q9NW13 759 aaKnown RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 HDAC6Q9UBN7 1215 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 KIAA0232Q92628 1395 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 PLEKHG3A1L390 1219 aa14.79□□□□□ -0.04
COL2A1-201ENST00000337299 TTF1Q15361 905 aaPredicted RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 FMR1NBQ8N0W7 255 aaPredicted RBP14.79□□□□□ -0.04
COL2A1-201ENST00000337299 CARMIL3Q8ND23 1372 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 KCNQ3O43525 872 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms