RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TERTO14746 1132 aaKnown RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 TRIM16O95361 564 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 GRK4P32298 578 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 CXCL9Q07325 125 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 PDE4CQ08493 712 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 SIGLEC14Q08ET2 396 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 TEAD4Q15561 434 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 FAM26DQ5JW98 314 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 EPHA10Q5JZY3 1008 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 DACT2Q5SW24 774 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 FAM178BQ8IXR5 827 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 MB21D1Q8N884 522 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 P2RX5Q93086 422 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 FMNL2Q96PY5 1086 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 UBL7Q96S82 380 aaPredicted RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 APBA2Q99767 749 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 TMUB1Q9BVT8 246 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 IDI2Q9BXS1 227 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 TJP2Q9UDY2 1190 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 VPS9D1Q9Y2B5 631 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 PCDHGA2Q9Y5H1 932 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 ABCC4O15439 1325 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 ARID2Q68CP9 1835 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 DCXO43602 365 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 PAX3P23760 479 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 RPS9P46781 194 aaKnown RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 GSK3AP49840 483 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 KIAA0319Q5VV43 1072 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 DCAF15Q66K64 600 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 GIGYF2Q6Y7W6 1299 aaKnown RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 KCTD17Q8N5Z5 321 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 PABPC5Q96DU9 382 aaKnown RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 SEMA3CQ99985 751 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 STRN4Q9NRL3 753 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 ABCB11O95342 1321 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 AOX1Q06278 1338 aa2.18□□□□□ -2.06
LINC00643-201ENST00000334389 RP1L1Q8IWN7 2480 aaPredicted RBP2.18□□□□□ -2.06
LINC00643-201ENST00000334389 FAM221AA4D161 298 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TRIM75PA6NK02 468 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 FYB1O15117 783 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 AOC2O75106 756 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TIMP1P01033 207 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 RAG1P15918 1043 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 MAGEA10P43363 369 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 GMPSP49915 693 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TCF15Q12870 199 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 KCNC3Q14003 757 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CHRNA2Q15822 529 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 MIER1Q8N108 512 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TTYH1Q9H313 450 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 IL23AQ9NPF7 189 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 USTQ9Y2C2 406 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 PCDHGA5Q9Y5G8 931 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 STRNO43815 780 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 DDNO94850 711 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CSRP1P21291 193 aaKnown RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 OAZ1P54368 228 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 HUNKP57058 714 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ZXDAP98168 799 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 KCTD2Q14681 263 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 SPDYCQ5MJ68 293 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 GLRX5Q86SX6 157 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 GLIS3Q8NEA6 775 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 U2AF1L4Q8WU68 220 aaKnown RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TBC1D22AQ8WUA7 517 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 EMID1Q96A84 441 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 BCANQ96GW7 911 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ZNF512BQ96KM6 892 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CDC5LQ99459 802 aaKnown RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 DEFB129Q9H1M3 183 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CABP1Q9NZU7 370 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ABT1Q9ULW3 272 aaKnown RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 OBSL1O75147 1896 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 PFASO15067 1338 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 MROH5Q6ZUA9 1318 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 TM4SF5O14894 197 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ATXN7O15265 892 aaPredicted RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CYBAP13498 195 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 HOXD12P35452 270 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 BCAMP50895 628 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 GRB14Q14449 540 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 PPP4R3BQ5MIZ7 849 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 MFSD5Q6N075 450 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ARRDC4Q8NCT1 418 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 ATP8B4Q8TF62 1192 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 KIFC2Q96AC6 838 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 CFAP44Q96MT7 982 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 NECTIN4Q96NY8 510 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 SETDB2Q96T68 719 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 EHD4Q9H223 541 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 PNNQ9H307 717 aaKnown RBP2.17□□□□□ -2.06
LINC00643-201ENST00000334389 MYOZ2Q9NPC6 264 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 SLC2A4RGQ9NR83 387 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 HDAC9Q9UKV0 1011 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 AGTPBP1Q9UPW5 1226 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 SNCAIPQ9Y6H5 919 aa2.17□□□□□ -2.06
LINC00643-201ENST00000334389 C19orf81C9J6K1 198 aa2.16□□□□□ -2.06
LINC00643-201ENST00000334389 INPPL1O15357 1258 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms