RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 TATDN1Q6P1N9 297 aa14.77□□□□□ -0.05
CMTM1-203ENST00000333001 DNAJC18Q9H819 358 aa14.77□□□□□ -0.05
CMTM1-203ENST00000333001 MCM9Q9NXL9 1143 aa14.77□□□□□ -0.05
CMTM1-203ENST00000333001 MKI67P46013 3256 aaKnown RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 SIPA1L1O43166 1804 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 GLRX3O76003 335 aaKnown RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 BACE1P56817 501 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 RRP1BQ14684 758 aaKnown RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 CERKLQ49MI3 558 aaPredicted RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 NBPF11Q86T75 865 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 KBTBD3Q8NAB2 608 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 SMCR8Q8TEV9 937 aaPredicted RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 CABP5Q9NP86 173 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 DCP1AQ9NPI6 582 aaPredicted RBP14.76□□□□□ -0.05
CMTM1-203ENST00000333001 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 CPA4Q9UI42 421 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
CMTM1-203ENST00000333001 ADGRA2Q96PE1 1338 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 MBD4O95243 580 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 CYP2C8P10632 490 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 OSBPP22059 807 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 HMGCS2P54868 508 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 LCORLQ8N3X6 602 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
CMTM1-203ENST00000333001 ARMT1Q9H993 441 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 SWAP70Q9UH65 585 aa14.75□□□□□ -0.05
CMTM1-203ENST00000333001 GDF11O95390 407 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 BCRP11274 1271 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 PSMC4P43686 418 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 GCLCP48506 637 aaPredicted RBP14.74□□□□□ -0.05
CMTM1-203ENST00000333001 PLCD1P51178 756 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 ABCB5Q2M3G0 1257 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 SLC4A8Q2Y0W8 1093 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 ANKRD45Q5TZF3 282 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 CCDC84Q86UT8 332 aaPredicted RBP14.74□□□□□ -0.05
CMTM1-203ENST00000333001 SDR42E1Q8WUS8 393 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.74□□□□□ -0.05
CMTM1-203ENST00000333001 HTTP42858 3142 aa14.74□□□□□ -0.05
CMTM1-203ENST00000333001 RNF113AO15541 343 aaKnown RBP14.73□□□□□ -0.05
CMTM1-203ENST00000333001 FMNL1O95466 1100 aaPredicted RBP14.73□□□□□ -0.05
CMTM1-203ENST00000333001 GH2P01242 217 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 MX1P20591 662 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 HOXA7P31268 230 aaPredicted RBP14.73□□□□□ -0.05
CMTM1-203ENST00000333001 USP14P54578 494 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 FCGRTP55899 365 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 GABPAQ06546 454 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 MTMR2Q13614 643 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 SLC4A4Q9Y6R1 1079 aa14.73□□□□□ -0.05
CMTM1-203ENST00000333001 NAV1Q8NEY1 1877 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 GNAT2P19087 354 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 SHMT1P34896 483 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 SLC9C1Q4G0N8 1177 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 TREML2Q5T2D2 321 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 GIMAP6Q6P9H5 292 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 USP17L2Q6R6M4 530 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 GTF3C2Q8WUA4 911 aaPredicted RBP14.72□□□□□ -0.05
CMTM1-203ENST00000333001 APPBP2Q92624 585 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 ARMC5Q96C12 935 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 PUS7LQ9H0K6 701 aaKnown RBP14.72□□□□□ -0.05
CMTM1-203ENST00000333001 SRRDQ9UH36 339 aa14.72□□□□□ -0.05
CMTM1-203ENST00000333001 BRCA2P51587 3418 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 LOC285556D6RIA3 1793 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 IRX3P78415 501 aaPredicted RBP14.71□□□□□ -0.05
CMTM1-203ENST00000333001 JAG1P78504 1218 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 RAB3GAP1Q15042 981 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 FAM110CQ1W6H9 321 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 PI4K2BQ8TCG2 481 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 CCDC17Q96LX7 622 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 STRBPQ96SI9 672 aaKnown RBP14.71□□□□□ -0.05
CMTM1-203ENST00000333001 FEZ1Q99689 392 aa14.71□□□□□ -0.05
CMTM1-203ENST00000333001 ASCC2Q9H1I8 757 aaPredicted RBP14.71□□□□□ -0.05
CMTM1-203ENST00000333001 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
CMTM1-203ENST00000333001 USP17L12C9JPN9 530 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 USP17L21D6R901 530 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 PRKAB2O43741 272 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 CAP1Q01518 475 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 C12orf60Q5U649 245 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 TSHZ3Q63HK5 1081 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 TRIM47Q96LD4 638 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 ARHGAP39Q9C0H5 1083 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 KIAA1683Q9H0B3 1180 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 ARPP21Q9UBL0 812 aaPredicted RBP14.7□□□□□ -0.06
CMTM1-203ENST00000333001 STAP2Q9UGK3 403 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 PTCH2Q9Y6C5 1203 aa14.7□□□□□ -0.06
CMTM1-203ENST00000333001 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
CMTM1-203ENST00000333001 SLFNL1Q499Z3 407 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 TMEM179Q6ZVK1 233 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 ANKRD13CQ8N6S4 541 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 RAET1EQ8TD07 263 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 OSBP2Q969R2 916 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 COA7Q96BR5 231 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 FSD1Q9BTV5 496 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 TMEM106CQ9BVX2 250 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
CMTM1-203ENST00000333001 MYPNQ86TC9 1320 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms