RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 IQCA1Q86XH1 822 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 ZSCAN10Q96SZ4 725 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 TMEM39BQ9GZU3 492 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 PGAP2Q9UHJ9 254 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 HACL1Q9UJ83 578 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 NMT2O60551 498 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 HIRAP54198 1017 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 TNFAIP1Q13829 316 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 CRACR2BQ8N4Y2 399 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 ENAHQ8N8S7 591 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 ZNF274Q96GC6 653 aaPredicted RBP14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
TRIM49B-201ENST00000332682 ERICH2A1L162 156 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 TSPY3P0CV98 308 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 TSPY8P0CW00 308 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 PDIA3P30101 505 aaKnown RBP14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 TNNI2P48788 182 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 STK3Q13188 491 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 WTAPQ15007 396 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 FOXP4Q8IVH2 680 aaPredicted RBP14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 CCDC83Q8IWF9 413 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 IL17RBQ9NRM6 502 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 ADARB2Q9NS39 739 aaKnown RBP14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 SCAF8Q9UPN6 1271 aaKnown RBP14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 SCN4AP35499 1836 aa14.19□□□□□ -0.14
TRIM49B-201ENST00000332682 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 GOLGA8BA8MQT2 603 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 PFKFB2O60825 505 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 RASA3Q14644 834 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 ANGEL2Q5VTE6 544 aaKnown RBP14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 RCSD1Q6JBY9 416 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 APOA5Q6Q788 366 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 TEPSINQ96N21 525 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 GGA3Q9NZ52 723 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
TRIM49B-201ENST00000332682 AKR1B1P15121 316 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 DDIT3P35638 169 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 SCRN1Q12765 414 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 NFXL1Q6ZNB6 911 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
TRIM49B-201ENST00000332682 NID2Q14112 1375 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 CCDC69A6NI79 296 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 DGKHQ86XP1 1220 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 DEFB129Q9H1M3 183 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 SLC12A7Q9Y666 1083 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 PITPNM2Q9BZ72 1349 aa14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
TRIM49B-201ENST00000332682 IGKV6D-41A0A0C4DH26 115 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 ZBTB43O43298 467 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 TBC1D12O60347 775 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 NOVP48745 357 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 MICU3Q86XE3 530 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 RAB11FIP4Q86YS3 637 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 ZNF654Q8IZM8 581 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 ANKS1AQ92625 1134 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 CCDC17Q96LX7 622 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 MYL10Q9BUA6 226 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 RXRAP19793 462 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 EPHX2P34913 555 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 RCAN1P53805 252 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 CCT2P78371 535 aaKnown RBP14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 CERKLQ49MI3 558 aaPredicted RBP14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 CEP95Q96GE4 821 aa14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
TRIM49B-201ENST00000332682 METAP2P50579 478 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 MAP3K10Q02779 954 aa14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 SHROOM1Q2M3G4 852 aaPredicted RBP14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 USP50Q70EL3 339 aaPredicted RBP14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 CWC22Q9HCG8 908 aaKnown RBP14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms