RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CCDC102AQ96A19 550 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 MAP3K14Q99558 947 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 MAN1B1Q9UKM7 699 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 KCNH3Q9ULD8 1083 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 AKR1B15C9JRZ8 316 aaPredicted RBP20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 RNF113AO15541 343 aaKnown RBP20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 FOXO4P98177 505 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 ITPK1Q13572 414 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 RGS22Q8NE09 1264 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 RHOXF2BP0C7M4 288 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 GUCY2CP25092 1073 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 HLFQ16534 295 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 LMBR1LQ6UX01 489 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 MB21D2Q8IYB1 491 aaPredicted RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 TRMT44Q8IYL2 757 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 ENOX1Q8TC92 643 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 AIFM3Q96NN9 605 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 RHOXF2Q9BQY4 288 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 ERVV-1B6SEH8 477 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 EIF5P55010 431 aaKnown RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 HAND2P61296 217 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 MDM2Q00987 491 aaPredicted RBP20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 ZNF569Q5MCW4 686 aa20.6■□□□□ 0.89
CLSTN3-202ENST00000331148 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 ANTXR2P58335 489 aa20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 NEUROD6Q96NK8 337 aa20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 TBC1D2BQ9UPU7 963 aa20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 ATRNO75882 1429 aa20.59■□□□□ 0.89
CLSTN3-202ENST00000331148 CTAGE9A4FU28 777 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 PHACTR2O75167 634 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 NR1I3Q14994 352 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 ALG1Q9BT22 464 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 NAA15Q9BXJ9 866 aaKnown RBP20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 MED4Q9NPJ6 270 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.89
CLSTN3-202ENST00000331148 IMMTQ16891 758 aaKnown RBP20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 ELOA2Q8IYF1 753 aaPredicted RBP20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 MLKLQ8NB16 471 aa20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 ACBD3Q9H3P7 528 aa20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 FAM204AQ9H8W3 233 aa20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 DACH1Q9UI36 760 aa20.58■□□□□ 0.88
CLSTN3-202ENST00000331148 A0A1B0GTH6 734 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 KRT40Q6A162 431 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 SAMSN1Q9NSI8 373 aaKnown RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 C4AP0C0L4 1744 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 C4BP0C0L5 1744 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 LRRIQ3A6PVS8 624 aaPredicted RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 FOXP2O15409 715 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 PCCAP05165 728 aaPredicted RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 POSTNQ15063 836 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 TTC39AQ5SRH9 613 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 OSBP2Q969R2 916 aa20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 HOOK1Q9UJC3 728 aaKnown RBP20.57■□□□□ 0.88
CLSTN3-202ENST00000331148 CTAGE15A4D2H0 777 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 ANKRD65E5RJM6 399 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 CTAGE8P0CG41 777 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 ZNF827Q17R98 1081 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 CTAGE6Q86UF2 777 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 CTAGE4Q8IX94 777 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 SLC35F6Q8N357 371 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 MED15Q96RN5 788 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 CPP00450 1065 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 PRR29P0C7W0 189 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 ATP2B1P20020 1258 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 WHAMMP3Q1A5X7 153 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 FAM182BQ5T319 152 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 RASGRP2Q7LDG7 609 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
CLSTN3-202ENST00000331148 ZMYM6O95789 1325 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 TUBBP07437 444 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 GPTP24298 496 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 RBL2Q08999 1139 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 MORC3Q14149 939 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 NT5DC1Q5TFE4 455 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 FAM89AQ96GI7 184 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 PLEKHA4Q9H4M7 779 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 TEX33O43247 280 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 TIMM10P62072 90 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 PPFIBP1Q86W92 1011 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 EFCAB13Q8IY85 973 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 SEPT12Q8IYM1 358 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 NCOA7Q8NI08 942 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 DRC1Q96MC2 740 aa20.55■□□□□ 0.88
CLSTN3-202ENST00000331148 NUP98P52948 1817 aa20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 RREB1Q92766 1687 aa20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 RNF40O75150 1001 aa20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 IFIT1P09914 478 aaKnown RBP20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 SARSP49591 514 aaKnown RBP20.54■□□□□ 0.88
CLSTN3-202ENST00000331148 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms