RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 WDR33Q9C0J8 1336 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 SHTN1A0MZ66 631 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 CA12O43570 354 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 CIAO1O76071 339 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 SASH1O94885 1247 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 CELF2O95319 508 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 GNAI3P08754 354 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 HSPA1AP0DMV8 641 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 HSPA1BP0DMV9 641 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 MTX1Q13505 466 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 TBC1D10BQ4KMP7 808 aaPredicted RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 VGLL2Q8N8G2 317 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 TDRD7Q8NHU6 1098 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 GGA3Q9NZ52 723 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 ABT1Q9ULW3 272 aaKnown RBP7.91□□□□□ -1.14
SMG1-201ENST00000330588 ZBED9Q6R2W3 1325 aa7.91□□□□□ -1.14
SMG1-201ENST00000330588 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 TRAF5O00463 557 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 EGFRP00533 1210 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 UBTFL1P0CB47 393 aaPredicted RBP7.9□□□□□ -1.14
SMG1-201ENST00000330588 PPP1R26Q5T8A7 1209 aaPredicted RBP7.9□□□□□ -1.14
SMG1-201ENST00000330588 APOBEC3FQ8IUX4 373 aaKnown RBP7.9□□□□□ -1.14
SMG1-201ENST00000330588 PRDM10Q9NQV6 1147 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
SMG1-201ENST00000330588 FKBPLQ9UIM3 349 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 NOB1Q9ULX3 412 aaKnown RBP7.9□□□□□ -1.14
SMG1-201ENST00000330588 SUGT1Q9Y2Z0 365 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 PPP2R3BQ9Y5P8 575 aa7.9□□□□□ -1.14
SMG1-201ENST00000330588 WTIPA6NIX2 430 aaPredicted RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 WNT10BO00744 389 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 TAF5LO75529 589 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 PDE8BO95263 885 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 KLRK1P26718 216 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 HIBADHP31937 336 aaKnown RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 RFX5P48382 616 aaPredicted RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 GTF2IP78347 998 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 HDLBPQ00341 1268 aaKnown RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 NOGQ13253 232 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 USP48Q86UV5 1035 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 C2orf69Q8N8R5 385 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 LRRN4Q8WUT4 740 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 CAPNS2Q96L46 248 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 MRIQ9BWK5 157 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 GBA2Q9HCG7 927 aaPredicted RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 CDV3Q9UKY7 258 aaKnown RBP7.89□□□□□ -1.15
SMG1-201ENST00000330588 LAMB1P07942 1786 aa7.89□□□□□ -1.15
SMG1-201ENST00000330588 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 EYA2O00167 538 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 SPINT1O43278 529 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 IFIT1P09914 478 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 FGFR2P21802 821 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 CTCFP49711 727 aaPredicted RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 PTPN12Q05209 780 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.88□□□□□ -1.156e-8■□□□□ 8.3
SMG1-201ENST00000330588 CAVIN4Q5BKX8 364 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 METTL24Q5JXM2 366 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 ANGEL2Q5VTE6 544 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 ATF7IPQ6VMQ6 1270 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 FAM84BQ96KN1 310 aaPredicted RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 OCSTAMPQ9BR26 566 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 ARHGAP9Q9BRR9 750 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 COPRSQ9NQ92 184 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 SNRKQ9NRH2 765 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 PGPEP1Q9NXJ5 209 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 MAST3O60307 1309 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 POLR2AP24928 1970 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 TRIM27P14373 513 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 NF2P35240 595 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 CERS5Q8N5B7 392 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 LPIN2Q92539 896 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 CDCA5Q96FF9 252 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 PUS3Q9BZE2 481 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 SERPINA10Q9UK55 444 aa7.88□□□□□ -1.15
SMG1-201ENST00000330588 PDS5AQ29RF7 1337 aaKnown RBP7.88□□□□□ -1.15
SMG1-201ENST00000330588 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 ADM5C9JUS6 153 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 MYO1BO43795 1136 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 SLC5A1P13866 664 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 IL15P40933 162 aaPredicted RBP7.87□□□□□ -1.15
SMG1-201ENST00000330588 HUNKP57058 714 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMG1-201ENST00000330588 KRT76Q01546 638 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 FMR1Q06787 632 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMG1-201ENST00000330588 CBLBQ13191 982 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 DLGAP5Q15398 846 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 MAP3K11Q16584 847 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 LRRC24Q50LG9 513 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 ZKSCAN2Q63HK3 967 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 RGMBQ6NW40 437 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 ATG9AQ7Z3C6 839 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
SMG1-201ENST00000330588 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 SAGE1Q9NXZ1 904 aa7.87□□□□□ -1.15
SMG1-201ENST00000330588 SNAP23O00161 211 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms