RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 CCDC171Q6TFL3 1326 aa19.7■□□□□ 0.74
TPM2-201ENST00000329305 CYP2D7A0A087X1C5 515 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 USP17L5A8MUK1 530 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 MINDY4BA8MYZ0 360 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 CXCL11O14625 94 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
TPM2-201ENST00000329305 RRP1BQ14684 758 aaKnown RBP19.69■□□□□ 0.74
TPM2-201ENST00000329305 MS4A4AQ96JQ5 239 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 RNF186Q9NXI6 227 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 ZBTB21Q9ULJ3 1066 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 KCNH4Q9UQ05 1017 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 DOCK1Q14185 1865 aa19.69■□□□□ 0.74
TPM2-201ENST00000329305 TESPA1A2RU30 521 aaPredicted RBP19.68■□□□□ 0.74
TPM2-201ENST00000329305 FOXN1O15353 648 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 TRPA1O75762 1119 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 SHMT1P34896 483 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 ABCB5Q2M3G0 1257 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 C16orf86Q6ZW13 317 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 RUFY2Q8WXA3 655 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 DYNLL2Q96FJ2 89 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 ZNF287Q9HBT7 754 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 AFG3L2Q9Y4W6 797 aa19.68■□□□□ 0.74
TPM2-201ENST00000329305 GH2P01242 217 aa19.67■□□□□ 0.74
TPM2-201ENST00000329305 SLC3A2P08195 630 aaKnown RBP19.67■□□□□ 0.74
TPM2-201ENST00000329305 EVX2Q03828 476 aa19.67■□□□□ 0.74
TPM2-201ENST00000329305 ZNF589Q86UQ0 364 aaPredicted RBP19.67■□□□□ 0.74
TPM2-201ENST00000329305 ZNF280CQ8ND82 737 aa19.67■□□□□ 0.74
TPM2-201ENST00000329305 BRI3BPQ8WY22 251 aa19.67■□□□□ 0.74
TPM2-201ENST00000329305 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
TPM2-201ENST00000329305 TRIM75PA6NK02 468 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 MPHOSPH10O00566 681 aaKnown RBP19.66■□□□□ 0.74
TPM2-201ENST00000329305 CDK8P49336 464 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 RAB3GAP1Q15042 981 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 CCDC84Q86UT8 332 aaPredicted RBP19.66■□□□□ 0.74
TPM2-201ENST00000329305 SLC44A5Q8NCS7 719 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 MKNK2Q9HBH9 465 aa19.66■□□□□ 0.74
TPM2-201ENST00000329305 IGF2BP3O00425 579 aaKnown RBP eCLIP19.65■□□□□ 0.74
TPM2-201ENST00000329305 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
TPM2-201ENST00000329305 SPP2Q13103 211 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 FASTKD5Q7L8L6 764 aaKnown RBP19.65■□□□□ 0.74
TPM2-201ENST00000329305 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 CCDC17Q96LX7 622 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 RAD50Q92878 1312 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 ROBO3Q96MS0 1386 aa19.65■□□□□ 0.74
TPM2-201ENST00000329305 BAZ2AQ9UIF9 1905 aaKnown RBP19.64■□□□□ 0.74
TPM2-201ENST00000329305 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
TPM2-201ENST00000329305 CHMLP26374 656 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 PDE4BQ07343 736 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 PPARAQ07869 468 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 ALX1Q15699 326 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 TMEM179Q6ZVK1 233 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
TPM2-201ENST00000329305 STK11IPQ8N1F8 1099 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 PTPN18Q99952 460 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
TPM2-201ENST00000329305 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 PCNTO95613 3336 aa19.64■□□□□ 0.73
TPM2-201ENST00000329305 ZMYM6O95789 1325 aa19.63■□□□□ 0.73
TPM2-201ENST00000329305 FOXP2O15409 715 aa19.63■□□□□ 0.73
TPM2-201ENST00000329305 HSPA8P11142 646 aaKnown RBP19.63■□□□□ 0.73
TPM2-201ENST00000329305 JAG1P78504 1218 aa19.63■□□□□ 0.73
TPM2-201ENST00000329305 SHROOM1Q2M3G4 852 aaPredicted RBP19.63■□□□□ 0.73
TPM2-201ENST00000329305 GADL1Q6ZQY3 521 aa19.63■□□□□ 0.73
TPM2-201ENST00000329305 LAMB1P07942 1786 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 BTBD19C9JJ37 291 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 SMIM22K7EJ46 135 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 TAF1CQ15572 869 aaPredicted RBP19.62■□□□□ 0.73
TPM2-201ENST00000329305 ANKRD23Q86SG2 305 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
TPM2-201ENST00000329305 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 C19orf81C9J6K1 198 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 TBC1D8O95759 1140 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 FGAP02671 866 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 AKR1B1P15121 316 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 LBX1P52954 281 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 BACE1P56817 501 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 MTMR2Q13614 643 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 ZNF444Q8N0Y2 327 aaPredicted RBP19.61■□□□□ 0.73
TPM2-201ENST00000329305 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 PROCA1Q8NCQ7 364 aaPredicted RBP19.61■□□□□ 0.73
TPM2-201ENST00000329305 FEZ1Q99689 392 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 DSCC1Q9BVC3 393 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 ZFYVE28Q9HCC9 887 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 TMOD4Q9NZQ9 345 aa19.61■□□□□ 0.73
TPM2-201ENST00000329305 HMGCS2P54868 508 aa19.6■□□□□ 0.73
TPM2-201ENST00000329305 SEPT2Q15019 361 aa19.6■□□□□ 0.73
TPM2-201ENST00000329305 CASC1Q6TDU7 716 aa19.6■□□□□ 0.73
TPM2-201ENST00000329305 PDHXO00330 501 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 RASA1P20936 1047 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 USP14P54578 494 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 PABPC4Q13310 644 aaKnown RBP eCLIP19.59■□□□□ 0.73
TPM2-201ENST00000329305 MOGSQ13724 837 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 SH3D19Q5HYK7 790 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
TPM2-201ENST00000329305 CTNNA3Q9UI47 895 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms