RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GPR108Q9NPR9 543 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 ITIH6Q6UXX5 1313 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 MYH7P12883 1935 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 RNF225M0QZC1 329 aaPredicted RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 EBAG9O00559 213 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 CD44P16070 742 aaKnown RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 RXRAP19793 462 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 PTPREP23469 700 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 MCM3P25205 808 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 METAP2P50579 478 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 TOB1P50616 345 aaPredicted RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 CUL4BQ13620 913 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 RALYLQ86SE5 291 aaKnown RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 FAM76AQ8TAV0 307 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 EHD4Q9H223 541 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 LAMB4A4D0S4 1761 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 PHRF1Q9P1Y6 1649 aaKnown RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 TARSL2A2RTX5 802 aaKnown RBP14.47□□□□□ -0.09
CCDC60-201ENST00000327554 CDKL5O76039 1030 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 TRDNQ13061 729 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 MMS19Q96T76 1030 aa14.47□□□□□ -0.09
CCDC60-201ENST00000327554 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 MYBL2P10244 700 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 STX17P56962 302 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 NTRK3Q16288 839 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 LMBR1LQ6UX01 489 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 ANKRD13DQ6ZTN6 518 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 LRP10Q7Z4F1 713 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 GDAP1L1Q96MZ0 367 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 SLF1Q9BQI6 1058 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 ABHD10Q9NUJ1 306 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 REXO2Q9Y3B8 237 aaKnown RBP14.46□□□□□ -0.09
CCDC60-201ENST00000327554 MST1RQ04912 1400 aa14.46□□□□□ -0.09
CCDC60-201ENST00000327554 UBE2Q2LH0YL09 131 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 RANBP6O60518 1105 aaKnown RBP14.46□□□□□ -0.1
CCDC60-201ENST00000327554 MAP2K2P36507 400 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 MNAT1P51948 309 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 CNPY4Q8N129 248 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 HDAC6Q9UBN7 1215 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 TRIM10Q9UDY6 481 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.1
CCDC60-201ENST00000327554 UBN2Q6ZU65 1347 aa14.46□□□□□ -0.1
CCDC60-201ENST00000327554 GOLGA6CA6NDK9 693 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 SEMA3EO15041 775 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 SLIT3O75094 1523 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 GOLGA6DP0CG33 693 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 PPFIA1Q13136 1202 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 APOA5Q6Q788 366 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 CYP26C1Q6V0L0 522 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 GSPT2Q8IYD1 628 aaKnown RBP14.45□□□□□ -0.1
CCDC60-201ENST00000327554 WDR17Q8IZU2 1322 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 SELENOOQ9BVL4 669 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 SENP2Q9HC62 589 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 GOLGA6AQ9NYA3 693 aa14.45□□□□□ -0.1
CCDC60-201ENST00000327554 A0A087WZG4 1122 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 PSMD14O00487 310 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
CCDC60-201ENST00000327554 CDC25AP30304 524 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 KLHL10Q6JEL2 608 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 USP49Q70CQ1 688 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 NOSTRINQ8IVI9 506 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 CRACR2AQ9BSW2 395 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 DONSONQ9NYP3 566 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 CEP83Q9Y592 693 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 TMEM94Q12767 1356 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 ENC1O14682 589 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 EIF3HO15372 352 aaKnown RBP eCLIP14.44□□□□□ -0.1
CCDC60-201ENST00000327554 ZMYND10O75800 440 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 FOXO4P98177 505 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 TRIM29Q14134 588 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 FILIP1LQ4L180 1135 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 NBPF14Q5TI25 921 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 C14orf37Q86TY3 774 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 POTEDQ86YR6 584 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 BCAS4Q8TDM0 211 aa14.44□□□□□ -0.1
CCDC60-201ENST00000327554 ATP5J2-PTCD1G3V325 749 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 ZNF213O14771 459 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 ATP1A1P05023 1023 aaKnown RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 ATP6V1AP38606 617 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 USP8P40818 1118 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 SLC39A6Q13433 755 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 PLPPR3Q6T4P5 718 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 CCNI2Q6ZMN8 369 aaPredicted RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 PRPF38AQ8NAV1 312 aaKnown RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 CAPS2Q9BXY5 557 aa14.43□□□□□ -0.1
CCDC60-201ENST00000327554 FAM217BQ9NTX9 383 aaPredicted RBP14.43□□□□□ -0.1
CCDC60-201ENST00000327554 GUCA1BQ9UMX6 200 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms