RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 GNL3LQ9NVN8 582 aaKnown RBP8.85□□□□□ -0.99
CD46-201ENST00000322875 DACH1Q9UI36 760 aa8.85□□□□□ -0.99
CD46-201ENST00000322875 REXO2Q9Y3B8 237 aaKnown RBP8.85□□□□□ -0.99
CD46-201ENST00000322875 MAST3O60307 1309 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 CPDO75976 1380 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 INPP5BP32019 993 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 NBPF14Q5TI25 921 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 DDX46Q7L014 1031 aaKnown RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 TRMT44Q8IYL2 757 aaKnown RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 STK11IPQ8N1F8 1099 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 CABS1Q96KC9 395 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 WWC3Q9ULE0 1092 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 BRD2P25440 801 aaKnown RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 CASP14P31944 242 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 PREPLQ4J6C6 727 aaPredicted RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
CD46-201ENST00000322875 RPGRIP1Q96KN7 1286 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 MMS19Q96T76 1030 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 SELENOOQ9BVL4 669 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 CAPS2Q9BXY5 557 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 PLEKHG1Q9ULL1 1385 aa8.84□□□□□ -0.99
CD46-201ENST00000322875 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
CD46-201ENST00000322875 SPATA1Q5VX52 437 aa8.83□□□□□ -1
CD46-201ENST00000322875 CEP120Q8N960 986 aa8.83□□□□□ -1
CD46-201ENST00000322875 BCAS4Q8TDM0 211 aa8.83□□□□□ -1
CD46-201ENST00000322875 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
CD46-201ENST00000322875 RGPD2P0DJD1 1756 aa8.83□□□□□ -1
CD46-201ENST00000322875 GOLGA6CA6NDK9 693 aa8.83□□□□□ -1
CD46-201ENST00000322875 LRRC10BA6NIK2 292 aa8.83□□□□□ -1
CD46-201ENST00000322875 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
CD46-201ENST00000322875 RNF225M0QZC1 329 aaPredicted RBP8.83□□□□□ -1
CD46-201ENST00000322875 GOLGA6DP0CG33 693 aa8.83□□□□□ -1
CD46-201ENST00000322875 ZNF572Q7Z3I7 529 aaPredicted RBP8.83□□□□□ -1
CD46-201ENST00000322875 SPATS2Q86XZ4 545 aaKnown RBP8.83□□□□□ -1
CD46-201ENST00000322875 ABHD10Q9NUJ1 306 aa8.83□□□□□ -1
CD46-201ENST00000322875 GOLGA6AQ9NYA3 693 aa8.83□□□□□ -1
CD46-201ENST00000322875 HOOK1Q9UJC3 728 aaKnown RBP8.83□□□□□ -1
CD46-201ENST00000322875 FBXO2Q9UK22 296 aaPredicted RBP8.83□□□□□ -1
CD46-201ENST00000322875 SLIT3O75094 1523 aa8.83□□□□□ -1
CD46-201ENST00000322875 PXDNQ92626 1479 aa8.83□□□□□ -1
CD46-201ENST00000322875 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
CD46-201ENST00000322875 BTBD11A6QL63 1104 aa8.83□□□□□ -1
CD46-201ENST00000322875 RASSF9O75901 435 aa8.83□□□□□ -1
CD46-201ENST00000322875 GCKRQ14397 625 aa8.83□□□□□ -1
CD46-201ENST00000322875 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
CD46-201ENST00000322875 TTLL5Q6EMB2 1281 aa8.83□□□□□ -1
CD46-201ENST00000322875 PPFIBP1Q86W92 1011 aa8.83□□□□□ -1
CD46-201ENST00000322875 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
CD46-201ENST00000322875 RUBCNQ92622 972 aa8.83□□□□□ -1
CD46-201ENST00000322875 MIEF2Q96C03 454 aa8.83□□□□□ -1
CD46-201ENST00000322875 FAXDC2Q96IV6 333 aa8.83□□□□□ -1
CD46-201ENST00000322875 UBR1Q8IWV7 1749 aa8.83□□□□□ -1
CD46-201ENST00000322875 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
CD46-201ENST00000322875 A6NNZ2 444 aa8.82□□□□□ -1
CD46-201ENST00000322875 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
CD46-201ENST00000322875 TUBB8Q3ZCM7 444 aa8.82□□□□□ -1
CD46-201ENST00000322875 KRT40Q6A162 431 aa8.82□□□□□ -1
CD46-201ENST00000322875 ZNF579Q8NAF0 562 aaKnown RBP8.82□□□□□ -1
CD46-201ENST00000322875 AIFM3Q96NN9 605 aa8.82□□□□□ -1
CD46-201ENST00000322875 PAG1Q9NWQ8 432 aa8.82□□□□□ -1
CD46-201ENST00000322875 KCNG1Q9UIX4 513 aa8.82□□□□□ -1
CD46-201ENST00000322875 GGA2Q9UJY4 613 aa8.82□□□□□ -1
CD46-201ENST00000322875 GOLGA8BA8MQT2 603 aa8.82□□□□□ -1
CD46-201ENST00000322875 GOLGA8KD6RF30 607 aa8.82□□□□□ -1
CD46-201ENST00000322875 M0R2C6 588 aa8.82□□□□□ -1
CD46-201ENST00000322875 MYO1FO00160 1098 aa8.82□□□□□ -1
CD46-201ENST00000322875 MEFVO15553 781 aaPredicted RBP8.82□□□□□ -1
CD46-201ENST00000322875 PTPREP23469 700 aa8.82□□□□□ -1
CD46-201ENST00000322875 MRPL12P52815 198 aaKnown RBP8.82□□□□□ -1
CD46-201ENST00000322875 PLCB4Q15147 1175 aa8.82□□□□□ -1
CD46-201ENST00000322875 ZNF827Q17R98 1081 aa8.82□□□□□ -1
CD46-201ENST00000322875 KRI1Q8N9T8 703 aaKnown RBP8.82□□□□□ -1
CD46-201ENST00000322875 JPH2Q9BR39 696 aaPredicted RBP8.82□□□□□ -1
CD46-201ENST00000322875 DDX21Q9NR30 783 aaKnown RBP eCLIP8.82□□□□□ -1
CD46-201ENST00000322875 NFAT5O94916 1531 aa8.81□□□□□ -1
CD46-201ENST00000322875 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
CD46-201ENST00000322875 CHUKO15111 745 aa8.81□□□□□ -1
CD46-201ENST00000322875 PRC1O43663 620 aa8.81□□□□□ -1
CD46-201ENST00000322875 TOB1P50616 345 aaPredicted RBP8.81□□□□□ -1
CD46-201ENST00000322875 NEDD9Q14511 834 aa8.81□□□□□ -1
CD46-201ENST00000322875 C11orf91Q3C1V1 193 aa8.81□□□□□ -1
CD46-201ENST00000322875 CYP26C1Q6V0L0 522 aa8.81□□□□□ -1
CD46-201ENST00000322875 SH3RF1Q7Z6J0 888 aa8.81□□□□□ -1
CD46-201ENST00000322875 CTAGE1Q96RT6 745 aa8.81□□□□□ -1
CD46-201ENST00000322875 SERTAD1Q9UHV2 236 aa8.81□□□□□ -1
CD46-201ENST00000322875 FAM184BQ9ULE4 1060 aa8.81□□□□□ -1
CD46-201ENST00000322875 CAPN7Q9Y6W3 813 aa8.81□□□□□ -1
CD46-201ENST00000322875 ARHGAP23Q9P227 1491 aa8.81□□□□□ -1
CD46-201ENST00000322875 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
CD46-201ENST00000322875 SHTN1A0MZ66 631 aa8.81□□□□□ -1
CD46-201ENST00000322875 GOLGA6BA6NDN3 693 aa8.81□□□□□ -1
CD46-201ENST00000322875 ATP1A1P05023 1023 aaKnown RBP8.81□□□□□ -1
CD46-201ENST00000322875 ELF1P32519 619 aa8.81□□□□□ -1
CD46-201ENST00000322875 GNGT1P63211 74 aa8.81□□□□□ -1
CD46-201ENST00000322875 AKAP17AQ02040 695 aaKnown RBP8.81□□□□□ -1
CD46-201ENST00000322875 GRIN1Q05586 938 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms