RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 EIF3CLB5ME19 914 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 MAGEA9P43362 315 aa20.31■□□□□ 0.84
PRKCB-202ENST00000321728 TTC31Q49AM3 519 aaPredicted RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 DIS3L2Q8IYB7 885 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 EIF3CQ99613 913 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 TTF2Q9UNY4 1162 aaKnown RBP20.31■□□□□ 0.84
PRKCB-202ENST00000321728 ANKRD65E5RJM6 399 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 ABL1P00519 1130 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 WHAMMP3Q1A5X7 153 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 FILIP1LQ4L180 1135 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 TMEM67Q5HYA8 995 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 NOA1Q8NC60 698 aaKnown RBP20.3■□□□□ 0.84
PRKCB-202ENST00000321728 SLIT3O75094 1523 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 LRRIQ3A6PVS8 624 aaPredicted RBP20.3■□□□□ 0.84
PRKCB-202ENST00000321728 IRX3P78415 501 aaPredicted RBP20.3■□□□□ 0.84
PRKCB-202ENST00000321728 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 SPATA1Q5VX52 437 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 LRRC31Q6UY01 552 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 USP49Q70CQ1 688 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 APTXQ7Z2E3 356 aaKnown RBP20.3■□□□□ 0.84
PRKCB-202ENST00000321728 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
PRKCB-202ENST00000321728 PLEKHA4Q9H4M7 779 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 SYNRGQ9UMZ2 1314 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 CNGA4Q8IV77 575 aa20.3■□□□□ 0.84
PRKCB-202ENST00000321728 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.846e-7■■□□□ 14.3
PRKCB-202ENST00000321728 ADAMTS7Q9UKP4 1686 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 ACTN4O43707 911 aaKnown RBP20.29■□□□□ 0.84
PRKCB-202ENST00000321728 AFMP43652 599 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 GTF2A1P52655 376 aaPredicted RBP20.29■□□□□ 0.84
PRKCB-202ENST00000321728 FAM217BQ9NTX9 383 aaPredicted RBP20.29■□□□□ 0.84
PRKCB-202ENST00000321728 ADD3Q9UEY8 706 aaKnown RBP20.29■□□□□ 0.84
PRKCB-202ENST00000321728 PCDHB6Q9Y5E3 794 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 SLC12A7Q9Y666 1083 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.843e-6■■□□□ 13.6
PRKCB-202ENST00000321728 PACS2Q86VP3 889 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 TMEM87BQ96K49 555 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 MED4Q9NPJ6 270 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 RNF216Q9NWF9 866 aaPredicted RBP20.29■□□□□ 0.84
PRKCB-202ENST00000321728 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
PRKCB-202ENST00000321728 MMP1P03956 469 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 SKIDA1Q1XH10 827 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 ICE2Q659A1 982 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 NCAPH2Q6IBW4 605 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 CCDC82Q8N4S0 544 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 CTAGE1Q96RT6 745 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 INCENPQ9NQS7 918 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 DDX60Q8IY21 1712 aaKnown RBP20.28■□□□□ 0.84
PRKCB-202ENST00000321728 GYPCP04921 128 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 TUBBP07437 444 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
PRKCB-202ENST00000321728 LY9Q9HBG7 655 aa20.28■□□□□ 0.84
PRKCB-202ENST00000321728 CD44P16070 742 aaKnown RBP20.27■□□□□ 0.84
PRKCB-202ENST00000321728 PBX1P40424 430 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.84
PRKCB-202ENST00000321728 WASF1Q92558 559 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 CSRNP2Q9H175 543 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 MYO6Q9UM54 1294 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
PRKCB-202ENST00000321728 RNF40O75150 1001 aa20.27■□□□□ 0.83
PRKCB-202ENST00000321728 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.83
PRKCB-202ENST00000321728 CASP1P29466 404 aa20.27■□□□□ 0.83
PRKCB-202ENST00000321728 CCT6AP40227 531 aaKnown RBP20.27■□□□□ 0.83
PRKCB-202ENST00000321728 IFIT3O14879 490 aaKnown RBP20.26■□□□□ 0.83
PRKCB-202ENST00000321728 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
PRKCB-202ENST00000321728 NR5A1Q13285 461 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 TMTC1Q8IUR5 882 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 CCDC148Q8NFR7 591 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 SRPRBQ9Y5M8 271 aaKnown RBP20.26■□□□□ 0.83
PRKCB-202ENST00000321728 SYNE4Q8N205 404 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 ZNF579Q8NAF0 562 aaKnown RBP20.26■□□□□ 0.83
PRKCB-202ENST00000321728 SPATA20Q8TB22 786 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
PRKCB-202ENST00000321728 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
PRKCB-202ENST00000321728 ERVK-24P63145 666 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 TRIM22Q8IYM9 498 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 AFAP1L1Q8TED9 768 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 DCAF5Q96JK2 942 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 SLF1Q9BQI6 1058 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 STK36Q9NRP7 1315 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 COBLO75128 1261 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 CORO7P57737 925 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
PRKCB-202ENST00000321728 JRKLQ9Y4A0 524 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 TMEM94Q12767 1356 aa20.25■□□□□ 0.83
PRKCB-202ENST00000321728 CDKAL1Q5VV42 579 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 SGMS1Q86VZ5 419 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 ECM29Q5VYK3 1845 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 N4BP3O15049 544 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 CDC25AP30304 524 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 ADD2P35612 726 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 ARHGAP25P42331 645 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms