RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SASH3O75995 380 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 SYKP43405 635 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 ATL3Q6DD88 541 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 CREBRFQ8IUR6 639 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 CNNM2Q9H8M5 875 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 KIAA1468Q9P260 1216 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 USP17L21D6R901 530 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 SMC2O95347 1197 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 YEATS4O95619 227 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 GRIN1Q05586 938 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 PNOCQ13519 176 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 TMC6Q7Z403 805 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 TRIM22Q8IYM9 498 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 OXER1Q8TDS5 423 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 NLRP3Q96P20 1036 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 XPO4Q9C0E2 1151 aaKnown RBP17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 ZNF654Q8IZM8 581 aa17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
SHROOM1-201ENST00000319854 ALX1Q15699 326 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 ZNF384Q8TF68 577 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 DNAI1Q9UI46 699 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 LCMT1Q9UIC8 334 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 FAM205CA6NFA0 338 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 CYP2D6P10635 497 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 LMOD1P29536 600 aaPredicted RBP17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 GYS2P54840 703 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 SLC39A14Q15043 492 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 SHC4Q6S5L8 630 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 KRBA2Q6ZNG9 492 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 SGMS1Q86VZ5 419 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 ZBTB9Q96C00 473 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 IFNKQ9P0W0 207 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 ATRNO75882 1429 aa17.8■□□□□ 0.44
SHROOM1-201ENST00000319854 FOXN1O15353 648 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 GSDMDP57764 484 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 ZFP91Q96JP5 570 aaPredicted RBP17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 BSDC1Q9NW68 430 aaPredicted RBP17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 TMCO3Q6UWJ1 677 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 FANCBQ8NB91 859 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 GNAT2P19087 354 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 LIFRP42702 1097 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 UBXN4Q92575 508 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 CABP5Q9NP86 173 aa17.79■□□□□ 0.44
SHROOM1-201ENST00000319854 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 TRIM66O15016 1216 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 TOM1O60784 492 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 HOMER1Q86YM7 354 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 MECOMQ03112 1051 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 ESR2Q92731 530 aa17.78■□□□□ 0.44
SHROOM1-201ENST00000319854 PLEKHA8P1O95397 391 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 TRIM65Q6PJ69 517 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 BARGINQ6ZT62 677 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 GRAMD1CQ8IYS0 662 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 UBXN6Q9BZV1 441 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 V9GY48 417 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 PSDA5PKW4 1024 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 FMNL1O95466 1100 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 IFIT1BQ5T764 474 aaKnown RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 NOSTRINQ8IVI9 506 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 CARD6Q9BX69 1037 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 NAT10Q9H0A0 1025 aaKnown RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 PCDHB6Q9Y5E3 794 aa17.77■□□□□ 0.44
SHROOM1-201ENST00000319854 TBC1D8O95759 1140 aa17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 CMA1P23946 247 aa17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 HIBADHP31937 336 aaKnown RBP17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 ETF1P62495 437 aaKnown RBP17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 UBE4AQ14139 1066 aa17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 CCDC34Q96HJ3 373 aa17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.43
SHROOM1-201ENST00000319854 IFNAR1P17181 557 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 PNPLA7Q6ZV29 1317 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 TADA3O75528 432 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 OAS2P29728 719 aaKnown RBP17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 GOLGA8FQ08AF8 430 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 GOLGA8DPQ0D2H9 430 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 ZNF827Q17R98 1081 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms