RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CCAR1Q8IX12 1150 aaKnown RBP8.8□□□□□ -1
TRIM55-202ENST00000315962 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 OXER1Q8TDS5 423 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 TMEM87BQ96K49 555 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 CNNM2Q9H8M5 875 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 MKNK2Q9HBH9 465 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 SPTLC3Q9NUV7 552 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 VPS54Q9P1Q0 977 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 SCAF8Q9UPN6 1271 aaKnown RBP8.8□□□□□ -1
TRIM55-202ENST00000315962 LEMD3Q9Y2U8 911 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 ZMYM6O95789 1325 aa8.8□□□□□ -1
TRIM55-202ENST00000315962 TNRC6CQ9HCJ0 1690 aaKnown RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 FAM205CA6NFA0 338 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 MAPK8IP2Q13387 824 aaPredicted RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 PTPN21Q16825 1174 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 DPP8Q6V1X1 898 aaPredicted RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 NBPF11Q86T75 865 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 AKT1S1Q96B36 256 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 CLIC6Q96NY7 704 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 FAM196BA6NMK8 535 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 BBOX1O75936 387 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 TNNT1P13805 278 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 DMTNQ08495 405 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 TCP10Q12799 353 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 CACTINQ8WUQ7 758 aaKnown RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 ZSCAN16Q9H4T2 348 aaPredicted RBP8.79□□□□□ -1
TRIM55-202ENST00000315962 CFAP45Q9UL16 551 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 PCDHA7Q9UN72 937 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 IRS2Q9Y4H2 1338 aa8.79□□□□□ -1
TRIM55-202ENST00000315962 ADAMTS3O15072 1205 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 RBM5P52756 815 aaKnown RBP eCLIP8.78□□□□□ -1
TRIM55-202ENST00000315962 NCBP1Q09161 790 aaKnown RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 STK38Q15208 465 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 TPD52L1Q16890 204 aaPredicted RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 C11orf57Q6ZUT1 292 aaPredicted RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 IQCA1Q86XH1 822 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 CERS5Q8N5B7 392 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 WDR66Q8TBY9 1149 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 RNF41Q9H4P4 317 aaPredicted RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 LRP5O75197 1615 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 BIN1O00499 593 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 ZBTB22O15209 634 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 ZNF165P49910 485 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 KIF23Q02241 960 aaPredicted RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 MTERF4Q7Z6M4 381 aaKnown RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 C2CD5Q86YS7 1000 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 FBXO41Q8TF61 875 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 BRIP1Q9BX63 1249 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 ST7Q9NRC1 585 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
TRIM55-202ENST00000315962 CICQ96RK0 1608 aaPredicted RBP8.78□□□□□ -1
TRIM55-202ENST00000315962 PLSCR1O15162 318 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 LIFRP42702 1097 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 TRIM29Q14134 588 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 CPLX2Q6PUV4 134 aaKnown RBP8.77□□□□□ -1
TRIM55-202ENST00000315962 SGMS1Q86VZ5 419 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 TICAM2Q86XR7 235 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 TEX11Q8IYF3 940 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 STAG2Q8N3U4 1231 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 FSIP1Q8NA03 581 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 SHISA4Q96DD7 197 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 IL17RBQ9NRM6 502 aa8.77□□□□□ -1
TRIM55-202ENST00000315962 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1
TRIM55-202ENST00000315962 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 C21orf2O43822 256 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 ATP2B4P23634 1241 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 NDUFA8P51970 172 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 SEC23AQ15436 765 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 NOL10Q9BSC4 688 aaKnown RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 CABP5Q9NP86 173 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 SEMA3EO15041 775 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 WDHD1O75717 1129 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 LETM1O95202 739 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 TSPY3P0CV98 308 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 TSPY8P0CW00 308 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 ATP2B2Q01814 1243 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 GRIN1Q05586 938 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 SHROOM1Q2M3G4 852 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 EARS2Q5JPH6 523 aaKnown RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 SPTY2D1Q68D10 685 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 CATIPQ7Z7H3 387 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 DIS3L2Q8IYB7 885 aaKnown RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 CRACR2BQ8N4Y2 399 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 RTFDC1Q9BY42 306 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-202ENST00000315962 ATP6V0A2Q9Y487 856 aa8.77□□□□□ -1.01
TRIM55-202ENST00000315962 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 GOLGA6L6A8MZA4 724 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 BAG3O95817 575 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 ZNF75DP51815 510 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 AOC3Q16853 763 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 ZNF771Q7L3S4 317 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-202ENST00000315962 ZFPM1Q8IX07 1006 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 TRIM22Q8IYM9 498 aa8.76□□□□□ -1.01
TRIM55-202ENST00000315962 FBXL16Q8N461 479 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms