RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 WNK3Q9BYP7 1800 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 M0R2C6 588 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 WDHD1O75717 1129 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 CYP21A2P08686 494 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 TOP1P11387 765 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SYT1P21579 422 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 RDXP35241 583 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 TPD52L1Q16890 204 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 DCAF15Q66K64 600 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 HHIPL2Q6UWX4 724 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 MICU3Q86XE3 530 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 OSBP2Q969R2 916 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 FAM84BQ96KN1 310 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SLC26A6Q9BXS9 759 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SH3GLB2Q9NR46 395 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 PIM2Q9P1W9 311 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 LMOD1P29536 600 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 STRIP1Q5VSL9 837 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SGMS1Q86VZ5 419 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 ZSCAN30Q86W11 494 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 MIGA1Q8NAN2 632 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 GLI3P10071 1580 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 SMARCA1P28370 1054 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 BTDP43251 543 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 APOBRQ0VD83 1088 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 DLGAP5Q15398 846 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 ASPRV1Q53RT3 343 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 DALRD3Q5D0E6 543 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 GPATCH4Q5T3I0 446 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 CCDC129Q6ZRS4 1044 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 CCDC91Q7Z6B0 441 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 CELF1Q92879 486 aaKnown RBP6.85□□□□□ -1.31
SEC22A-201ENST00000309934 RMND1Q9NWS8 449 aa6.85□□□□□ -1.31
SEC22A-201ENST00000309934 FAM205AQ6ZU69 1335 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 SH2B2O14492 632 aaPredicted RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 BIRC2Q13490 618 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 KRT25Q7Z3Z0 450 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 RABGAP1Q9Y3P9 1069 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 CEP83Q9Y592 693 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 B4E1Z4 1266 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 FGFR1OPO95684 399 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 RPS12P25398 132 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TM4SF1P30408 202 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 SATB1Q01826 763 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 SEMA3FQ13275 785 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 CCDC96Q2M329 555 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 VGLL2Q8N8G2 317 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 DDX11Q96FC9 970 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 AATFQ9NY61 560 aaKnown RBP eCLIP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TRIM75PA6NK02 468 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TTC36A6NLP5 189 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 IL1R1P14778 569 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 GTF2IP78347 998 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 MECOMQ03112 1051 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 TSR1Q2NL82 804 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 RBM26Q5T8P6 1007 aaKnown RBP6.84□□□□□ -1.31
SEC22A-201ENST00000309934 PPP1R18Q6NYC8 613 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 PRDM16Q9HAZ2 1276 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 AS3MTQ9HBK9 375 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
SEC22A-201ENST00000309934 LAD1O00515 517 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 IFNAR1P17181 557 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 CCT2P78371 535 aaKnown RBP6.84□□□□□ -1.32
SEC22A-201ENST00000309934 GPR162Q16538 588 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 CRY2Q49AN0 593 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 FILIP1LQ4L180 1135 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 ZNF589Q86UQ0 364 aaPredicted RBP6.84□□□□□ -1.32
SEC22A-201ENST00000309934 ZNF654Q8IZM8 581 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 TXLNBQ8N3L3 684 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 TBC1D16Q8TBP0 767 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 MRPS27Q92552 414 aaKnown RBP6.84□□□□□ -1.32
SEC22A-201ENST00000309934 FERMT2Q96AC1 680 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 TCP11L1Q9NUJ3 509 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 USP40Q9NVE5 1235 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 RSPH14Q9UHP6 348 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 WWC3Q9ULE0 1092 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.32
SEC22A-201ENST00000309934 RIMBP2O15034 1052 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 PDIA3P30101 505 aaKnown RBP6.83□□□□□ -1.32
SEC22A-201ENST00000309934 ERMNQ8TAM6 284 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 FAM163AQ96GL9 167 aaPredicted RBP6.83□□□□□ -1.32
SEC22A-201ENST00000309934 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
SEC22A-201ENST00000309934 THSD7AQ9UPZ6 1657 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 USP17L12C9JPN9 530 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 USP17L21D6R901 530 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 POLRMTO00411 1230 aaKnown RBP6.83□□□□□ -1.32
SEC22A-201ENST00000309934 SLC26A4O43511 780 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 CUTAO60888 179 aa6.83□□□□□ -1.32
SEC22A-201ENST00000309934 ENTPD3O75355 529 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms