RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TMEM232C9JQI7 657 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 CBFA2T2O43439 604 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 KCNQ2O43526 872 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 UBASH3AP57075 661 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 POSTNQ15063 836 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 PKN1Q16512 942 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 RNF26Q9BY78 433 aaPredicted RBP17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 INTS13Q9NVM9 706 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 FANCLQ9NW38 375 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 SRPRBQ9Y5M8 271 aaKnown RBP17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 MYH2Q9UKX2 1941 aa17.46■□□□□ 0.39
SPIRE1-201ENST00000309836 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 ACTN4O43707 911 aaKnown RBP17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 MYO1BO43795 1136 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 VSTM4Q8IW00 320 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 GRAMD1CQ8IYS0 662 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 ZSCAN10Q96SZ4 725 aaPredicted RBP17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 BRIP1Q9BX63 1249 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 MINPP1Q9UNW1 487 aa17.46■□□□□ 0.38
SPIRE1-201ENST00000309836 SERPINC1P01008 464 aa17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 SARSP49591 514 aaKnown RBP17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 NT5DC1Q5TFE4 455 aa17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 USP49Q70CQ1 688 aa17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
SPIRE1-201ENST00000309836 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 KIF2AO00139 706 aaPredicted RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 ATP2B1P20020 1258 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 MORC3Q14149 939 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 PTPN21Q16825 1174 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 CSRNP2Q9H175 543 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 PRDM1O75626 825 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 FGRP09769 529 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 KLRK1P26718 216 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 CFAP100Q494V2 611 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 KIF18AQ8NI77 898 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 HOOK1Q9UJC3 728 aaKnown RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 MORC2Q9Y6X9 1032 aaPredicted RBP17.44■□□□□ 0.38
SPIRE1-201ENST00000309836 hCG_1642624A0A1W2PR95 340 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 EVX2Q03828 476 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 GOLGA8FQ08AF8 430 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 GOLGA8DPQ0D2H9 430 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 PPP2R5BQ15173 497 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
SPIRE1-201ENST00000309836 CAVIN4Q5BKX8 364 aa17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 SMIM5Q71RC9 77 aa17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 SMARCE1Q969G3 411 aa17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 MED15Q96RN5 788 aa17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
SPIRE1-201ENST00000309836 A0A087X0B3 334 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 TRIM75PA6NK02 468 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 WNT7AO00755 349 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 ZNF18P17022 549 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 KRT2P35908 639 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 CBX1P83916 185 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 AKAP17AQ02040 695 aaKnown RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 IFIT1BQ5T764 474 aaKnown RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 CATIPQ7Z7H3 387 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 PDILTQ8N807 584 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 MLKLQ8NB16 471 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 ZMYND15Q9H091 742 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 LAMB1P07942 1786 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 KCNQ4P56696 695 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 TROAPQ12815 778 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 TBX2Q13207 712 aaPredicted RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 NPY5RQ15761 445 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 TNFRSF25Q93038 417 aa17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 NSUN4Q96CB9 384 aaKnown RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
SPIRE1-201ENST00000309836 NRDCO43847 1150 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
SPIRE1-201ENST00000309836 SYT10Q6XYQ8 523 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms