RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 ZNF445P59923 1031 aa20.75■□□□□ 0.91
UBXN2A-201ENST00000309033 ZMYND15Q9H091 742 aa20.75■□□□□ 0.91
UBXN2A-201ENST00000309033 TMEM63CQ9P1W3 806 aa20.75■□□□□ 0.91
UBXN2A-201ENST00000309033 DISP1Q96F81 1524 aa20.75■□□□□ 0.91
UBXN2A-201ENST00000309033 EBAG9O00559 213 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 CETN3O15182 167 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 CTSWP56202 376 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 KRT25Q7Z3Z0 450 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 ATP10AO60312 1499 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 CCDC26Q8TAB7 109 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 C8orf74Q6P047 294 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 KIAA0232Q92628 1395 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 VWA3BQ502W6 1294 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 TRIM31Q9BZY9 425 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 TXNDC16Q9P2K2 825 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 TMOD4Q9NZQ9 345 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 OGFRQ9NZT2 677 aa20.74■□□□□ 0.91
UBXN2A-201ENST00000309033 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 NBPF14Q5TI25 921 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 TTLL7Q6ZT98 887 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 MYCT1Q8N699 235 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 ELF2Q15723 593 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 KDRP35968 1356 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 ATP2A2P16615 1042 aaKnown RBP20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 TCIRG1Q13488 830 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 CFBP00751 764 aa20.73■□□□□ 0.91
UBXN2A-201ENST00000309033 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 FAM169AQ9Y6X4 670 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 KDM5AP29375 1690 aaKnown RBP20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 MAST3O60307 1309 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 GCNT3O95395 438 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 NDC80O14777 642 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 STX10O60499 249 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 STRN3Q13033 797 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 IFT74Q96LB3 600 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 SMC6Q96SB8 1091 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 GINS2Q9Y248 185 aa20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 CFAP65Q6ZU64 1925 aaKnown RBP20.72■□□□□ 0.91
UBXN2A-201ENST00000309033 BRD1O95696 1058 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 DNM3Q9UQ16 869 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 SDR42E1Q8WUS8 393 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 NOX5Q96PH1 765 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 TPCN1Q9ULQ1 816 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 PLXNC1O60486 1568 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 LRRC24Q50LG9 513 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 GYG1P46976 350 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 CEP57Q86XR8 500 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 SAMD15Q9P1V8 674 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 LARGE2Q8N3Y3 721 aa20.71■□□□□ 0.91
UBXN2A-201ENST00000309033 ZNF654Q8IZM8 581 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 PROCA1Q8NCQ7 364 aaPredicted RBP20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 SSH3Q8TE77 659 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 ZNF408Q9H9D4 720 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 MRPL44Q9H9J2 332 aaKnown RBP20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 TRPC3Q13507 836 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 PKP1Q13835 747 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 PPP1R21Q6ZMI0 780 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 PHKG2P15735 406 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 BCAMP50895 628 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 ADKP55263 362 aaKnown RBP20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 RASA3Q14644 834 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 RABEP2Q9H5N1 569 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 USP17L12C9JPN9 530 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 USP17L21D6R901 530 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 H0YIN7 160 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 FMNL3Q8IVF7 1028 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 IMPACTQ9P2X3 320 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 KIF24Q5T7B8 1368 aa20.7■□□□□ 0.9
UBXN2A-201ENST00000309033 NR1I2O75469 434 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 PFKFB1P16118 471 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 SLC9C1Q4G0N8 1177 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 KLHL7Q8IXQ5 586 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 NUP58Q9BVL2 599 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 XPO4Q9C0E2 1151 aaKnown RBP20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 PLEKHA4Q9H4M7 779 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 FRMPD2Q68DX3 1309 aaPredicted RBP20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 ARFGAP2Q8N6H7 521 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 NSMFQ6X4W1 530 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 PSMC4P43686 418 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 INF2Q27J81 1249 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 PLCD3Q8N3E9 789 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 FAM207AQ9NSI2 230 aaPredicted RBP20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 USTQ9Y2C2 406 aa20.69■□□□□ 0.9
UBXN2A-201ENST00000309033 IFNL3Q8IZI9 196 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 CTTNBP2NLQ9P2B4 639 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 EXOC7Q9UPT5 735 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 VIMP08670 466 aaKnown RBP20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 GTF2IP78347 998 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 KIFC2Q96AC6 838 aa20.68■□□□□ 0.9
UBXN2A-201ENST00000309033 TM6SF1Q9BZW5 370 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms