RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 AIFM3Q96NN9 605 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 MEGF6O75095 1541 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 SCARF1Q14162 830 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 MYO1FO00160 1098 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 KIF5CO60282 957 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 RNF40O75150 1001 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
MSRB3-201ENST00000308259 NDUFA8P51970 172 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
MSRB3-201ENST00000308259 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 BRD3Q15059 726 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 FAM71BQ8TC56 605 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 TUBB4AP04350 444 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 ZRSR2Q15696 482 aaKnown RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 RABL6Q3YEC7 729 aaPredicted RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 DHX40Q8IX18 779 aaKnown RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 ARL10Q8N8L6 244 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 PSD3Q9NYI0 1048 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 BAIAP2L1Q9UHR4 511 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 BUB1BO60566 1050 aaPredicted RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 CASP7P55210 303 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 DPCR1Q3MIW9 517 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
MSRB3-201ENST00000308259 ETAA1Q9NY74 926 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 RWDD2BP57060 319 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 GNGT1P63211 74 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 STK38Q15208 465 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 REXO1L1PQ8IX06 675 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 PLBD2Q8NHP8 589 aa11.8□□□□□ -0.52
MSRB3-201ENST00000308259 NCAPD2Q15021 1401 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 KLF18A0A0U1RQI7 1052 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CAVIN2O95810 425 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 BAG6P46379 1132 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 EXOSC10Q01780 885 aaKnown RBP11.79□□□□□ -0.52
MSRB3-201ENST00000308259 INF2Q27J81 1249 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 RCOR1Q9UKL0 485 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CCDC151A5D8V7 595 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CCDC121Q6ZUS5 278 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 B4GALNT4Q76KP1 1039 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 PRDM16Q9HAZ2 1276 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
MSRB3-201ENST00000308259 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 UBE2Q2LH0YL09 131 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
MSRB3-201ENST00000308259 TADA3O75528 432 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 TXLNAP40222 546 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
MSRB3-201ENST00000308259 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA8FQ08AF8 430 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 GOLGA8DPQ0D2H9 430 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 VPS37DQ86XT2 251 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 CPLX3Q8WVH0 158 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
MSRB3-201ENST00000308259 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 EIF4E1BA6NMX2 242 aaKnown RBP11.78□□□□□ -0.52
MSRB3-201ENST00000308259 TTC39AQ5SRH9 613 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 FKBP15Q5T1M5 1219 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 SUGCTQ9HAC7 445 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
MSRB3-201ENST00000308259 RMI1Q9H9A7 625 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 CPLX1O14810 134 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 PRC1O43663 620 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ZRANB2O95218 330 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSRB3-201ENST00000308259 GPTP24298 496 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ZAP70P43403 619 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 SNCBQ16143 134 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
MSRB3-201ENST00000308259 ABCB6Q9NP58 842 aa11.78□□□□□ -0.52
MSRB3-201ENST00000308259 EYA2O00167 538 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 FGAP02671 866 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 RFC4P35249 363 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 NAA16Q6N069 864 aaPredicted RBP11.77□□□□□ -0.52
MSRB3-201ENST00000308259 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 TBC1D22AQ8WUA7 517 aa11.77□□□□□ -0.52
MSRB3-201ENST00000308259 MYL10Q9BUA6 226 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms