RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TPM1P09493 284 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
PTPN9-201ENST00000306726 CENPHQ9H3R5 247 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
PTPN9-201ENST00000306726 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
PTPN9-201ENST00000306726 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
PTPN9-201ENST00000306726 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
PTPN9-201ENST00000306726 VWA3AA6NCI4 1184 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 MBD4O95243 580 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 CDC27P30260 824 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 GABPB1Q06547 395 aaPredicted RBP16.62■□□□□ 0.25
PTPN9-201ENST00000306726 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
PTPN9-201ENST00000306726 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTPN9-201ENST00000306726 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 COPRSQ9NQ92 184 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 TEX33O43247 280 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 KIF5CO60282 957 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
PTPN9-201ENST00000306726 ACRBPQ8NEB7 543 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 ZBTB1Q9Y2K1 713 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 CAVIN2O95810 425 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 PTPROQ16827 1216 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
PTPN9-201ENST00000306726 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
PTPN9-201ENST00000306726 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 KIF2AO00139 706 aaPredicted RBP16.61■□□□□ 0.25
PTPN9-201ENST00000306726 RNASE9P60153 205 aaKnown RBP16.61■□□□□ 0.25
PTPN9-201ENST00000306726 TSR1Q2NL82 804 aaKnown RBP16.61■□□□□ 0.25
PTPN9-201ENST00000306726 LRRFIP1Q32MZ4 808 aaKnown RBP16.61■□□□□ 0.25
PTPN9-201ENST00000306726 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 FAM107BQ9H098 131 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 ZNF532Q9HCE3 1301 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 CYB5R4Q7L1T6 521 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 TAB2Q9NYJ8 693 aa16.61■□□□□ 0.25
PTPN9-201ENST00000306726 NUP188Q5SRE5 1749 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 TRIM28Q13263 835 aaKnown RBP16.6■□□□□ 0.25
PTPN9-201ENST00000306726 ZMYM1Q5SVZ6 1142 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 SDR42E1Q8WUS8 393 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
PTPN9-201ENST00000306726 ENGASEQ8NFI3 743 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 MORC2Q9Y6X9 1032 aaPredicted RBP16.6■□□□□ 0.25
PTPN9-201ENST00000306726 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 SMIM22K7EJ46 135 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 PHKA1P46020 1223 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 NYAP1Q6ZVC0 841 aa16.6■□□□□ 0.25
PTPN9-201ENST00000306726 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
PTPN9-201ENST00000306726 PCDHB6Q9Y5E3 794 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 FILIP1LQ4L180 1135 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 TBC1D10CQ8IV04 446 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 OXER1Q8TDS5 423 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
PTPN9-201ENST00000306726 N4BP1O75113 896 aaKnown RBP16.59■□□□□ 0.25
PTPN9-201ENST00000306726 MCM7P33993 719 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
PTPN9-201ENST00000306726 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
PTPN9-201ENST00000306726 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
PTPN9-201ENST00000306726 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.25
PTPN9-201ENST00000306726 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.25
PTPN9-201ENST00000306726 HELLSQ9NRZ9 838 aa16.58■□□□□ 0.25
PTPN9-201ENST00000306726 CTNND2Q9UQB3 1225 aa16.58■□□□□ 0.25
PTPN9-201ENST00000306726 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 ZSCAN26Q16670 478 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 BCORQ6W2J9 1755 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 GNPATO15228 680 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 ITGA6P23229 1130 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
PTPN9-201ENST00000306726 CHMP4BP1P59074 171 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
PTPN9-201ENST00000306726 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 KRI1Q8N9T8 703 aaKnown RBP16.57■□□□□ 0.24
PTPN9-201ENST00000306726 V9GY48 417 aaPredicted RBP16.57■□□□□ 0.24
PTPN9-201ENST00000306726 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 QSER1Q2KHR3 1735 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 PLA2G4AP47712 749 aa16.57■□□□□ 0.24
PTPN9-201ENST00000306726 TCIRG1Q13488 830 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms