RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
PCDHGC4-201ENST00000306593 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
PCDHGC4-201ENST00000306593 SLIT3O75094 1523 aa12.35□□□□□ -0.43
PCDHGC4-201ENST00000306593 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
PCDHGC4-201ENST00000306593 DNAI1Q9UI46 699 aa12.35□□□□□ -0.43
PCDHGC4-201ENST00000306593 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 USP17L21D6R901 530 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 PRDM1O75626 825 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 BAG1Q99933 345 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 EYA3Q99504 573 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 UFL1O94874 794 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
PCDHGC4-201ENST00000306593 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 KRT25Q7Z3Z0 450 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 TFCP2L1Q9NZI6 479 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 SDR42E1Q8WUS8 393 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 LEMD3Q9Y2U8 911 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 BTBD18B2RXH4 712 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 MMP1P03956 469 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 PGBD1Q96JS3 809 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 SYNRGQ9UMZ2 1314 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 CCDC94Q9BW85 323 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 BRIP1Q9BX63 1249 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
PCDHGC4-201ENST00000306593 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 PNOCQ13519 176 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 FEZ1Q99689 392 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 CDR1P51861 262 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 ASIC1P78348 528 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 IGSF3O75054 1194 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 IDEP14735 1019 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 TFAP4Q01664 338 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 TUBB2AQ13885 445 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 TNIP1Q15025 636 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 KRT79Q5XKE5 535 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 SGMS1Q86VZ5 419 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 TUBB2BQ9BVA1 445 aa12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
PCDHGC4-201ENST00000306593 SCG2P13521 617 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 SERTAD1Q9UHV2 236 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 ATP2B4P23634 1241 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 ERFEQ4G0M1 354 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 HSP90AA4PQ58FG1 418 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 TBC1D10CQ8IV04 446 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 KRT83P78385 493 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 CEP112Q8N8E3 955 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 CASP7P55210 303 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 C11orf57Q6ZUT1 292 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 C17orf53Q8N3J3 647 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 BPIFA3Q9BQP9 254 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 USP21Q9UK80 565 aa12.31□□□□□ -0.44
PCDHGC4-201ENST00000306593 STX17P56962 302 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 CBX1P83916 185 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 SPECC1LQ69YQ0 1117 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 PRPF3O43395 683 aaKnown RBP12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 PAK1Q13153 545 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 SPECC1Q5M775 1068 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 ALS2CR12Q96Q35 445 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 PICALMQ13492 652 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 CCDC40Q4G0X9 1142 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 BLIDQ8IZY5 108 aa12.3□□□□□ -0.44
PCDHGC4-201ENST00000306593 XDHP47989 1333 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms