RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 CCT5P48643 541 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 SRGAP1Q7Z6B7 1085 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 ALG1Q9BT22 464 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 HOOK1Q9UJC3 728 aaKnown RBP20.35■□□□□ 0.85
RETREG1-201ENST00000306320 GUCA1BQ9UMX6 200 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 TFR2Q9UP52 801 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CPDO75976 1380 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 SPECC1LQ69YQ0 1117 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 APPBP2Q92624 585 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CTAGE15A4D2H0 777 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CUTAO60888 179 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CTAGE8P0CG41 777 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CTAGE6Q86UF2 777 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 CTAGE4Q8IX94 777 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 LLPHQ9BRT6 129 aaKnown RBP20.35■□□□□ 0.85
RETREG1-201ENST00000306320 INTS13Q9NVM9 706 aa20.35■□□□□ 0.85
RETREG1-201ENST00000306320 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
RETREG1-201ENST00000306320 RNF40O75150 1001 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 MAGEA9P43362 315 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 NOA1Q8NC60 698 aaKnown RBP20.34■□□□□ 0.85
RETREG1-201ENST00000306320 CENPHQ9H3R5 247 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 ANKZF1Q9H8Y5 726 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 SAMM50Q9Y512 469 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 MINDY4BA8MYZ0 360 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 MBD4O95243 580 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 MATR3P43243 847 aaKnown RBP eCLIP20.34■□□□□ 0.85
RETREG1-201ENST00000306320 FMR1Q06787 632 aaKnown RBP eCLIP20.34■□□□□ 0.85
RETREG1-201ENST00000306320 EHD4Q9H223 541 aa20.34■□□□□ 0.85
RETREG1-201ENST00000306320 HMGB1P09429 215 aaKnown RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 FBXW10Q5XX13 1052 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 CTR9Q6PD62 1173 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 RSRC2Q7L4I2 434 aaKnown RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 TC2NQ8N9U0 490 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 CAGE1Q8TC20 777 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 NUP133Q8WUM0 1156 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 HSD3B7Q9H2F3 369 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 CTAGE9A4FU28 777 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 POLR2DO15514 142 aaKnown RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 BEND6Q5SZJ8 279 aaPredicted RBP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 LRRC31Q6UY01 552 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 IGSF22Q8N9C0 903 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 NCOA7Q8NI08 942 aa20.33■□□□□ 0.85
RETREG1-201ENST00000306320 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
RETREG1-201ENST00000306320 SLC51AQ86UW1 340 aa20.33■□□□□ 0.84
RETREG1-201ENST00000306320 MTMR7Q9Y216 660 aa20.33■□□□□ 0.84
RETREG1-201ENST00000306320 LRRIQ3A6PVS8 624 aaPredicted RBP20.32■□□□□ 0.84
RETREG1-201ENST00000306320 SRGAP2O75044 1071 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 CDC25AP30304 524 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 TRIM29Q14134 588 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 VPS37DQ86XT2 251 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 KCNH3Q9ULD8 1083 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 ATP8B1O43520 1251 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 CIAO1O76071 339 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 PDE8BO95263 885 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 PDE6AP16499 860 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 BRD3Q15059 726 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 SHC4Q6S5L8 630 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
RETREG1-201ENST00000306320 PPM1EQ8WY54 764 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 FAM107BQ9H098 131 aa20.32■□□□□ 0.84
RETREG1-201ENST00000306320 PRDM1O75626 825 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 TUBB4AP04350 444 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 RAD9BQ6WBX8 426 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 FAM212AQ96EL1 285 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 NBPF3Q9H094 633 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 COL18A1P39060 1754 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 KDM4FA0A1W2PPD8 638 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 AKR1B15C9JRZ8 316 aaPredicted RBP20.31■□□□□ 0.84
RETREG1-201ENST00000306320 RBL2Q08999 1139 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 AFAP1L1Q8TED9 768 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 SDR42E1Q8WUS8 393 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 KIFC2Q96AC6 838 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 EEF2KMTQ96G04 330 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 HDAC6Q9UBN7 1215 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 METTL16Q86W50 562 aaKnown RBP20.31■□□□□ 0.84
RETREG1-201ENST00000306320 MYCBPQ99417 103 aaPredicted RBP20.31■□□□□ 0.84
RETREG1-201ENST00000306320 HPS5Q9UPZ3 1129 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 MAPK8IP1Q9UQF2 711 aa20.31■□□□□ 0.84
RETREG1-201ENST00000306320 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 RASGRF1Q13972 1273 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
RETREG1-201ENST00000306320 LRP2BPQ9P2M1 347 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 TRIM10Q9UDY6 481 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 PHRF1Q9P1Y6 1649 aaKnown RBP20.3■□□□□ 0.84
RETREG1-201ENST00000306320 NEDD4P46934 1319 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 GOLGA6L9A6NEM1 432 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 CSF1RP07333 972 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 CMA1P23946 247 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 GRIN1Q05586 938 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 CRACR2AQ9BSW2 395 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 GPR108Q9NPR9 543 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms