RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ATRIPQ8WXE1 791 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 CALCRLQ16602 461 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 EXOC7Q9UPT5 735 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 CCDC169A6NNP5 214 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 ZNF654Q8IZM8 581 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 VPS54Q9P1Q0 977 aa17.82■□□□□ 0.44
USP42-201ENST00000306177 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 NFE2L3Q9Y4A8 694 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 ERBB3P21860 1342 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 TTC14Q96N46 770 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 TNFAIP3P21580 790 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 SIK1P57059 783 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 MYSM1Q5VVJ2 828 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 IFT74Q96LB3 600 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
USP42-201ENST00000306177 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
USP42-201ENST00000306177 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 ZYXQ15942 572 aaKnown RBP17.81■□□□□ 0.44
USP42-201ENST00000306177 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 DNM3Q9UQ16 869 aa17.81■□□□□ 0.44
USP42-201ENST00000306177 KRT5P13647 590 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 PDE6AP16499 860 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 CALCOCO2Q13137 446 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 IFNL3Q8IZI9 196 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 REXO1Q8N1G1 1221 aaKnown RBP17.8■□□□□ 0.44
USP42-201ENST00000306177 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
USP42-201ENST00000306177 CABP7Q86V35 215 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 ERO1AQ96HE7 468 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 ZSWIM6Q9HCJ5 1215 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 APBA3O96018 575 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
USP42-201ENST00000306177 PDE6BP35913 854 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 GYG1P46976 350 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 PPP2R3AQ06190 1150 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 HERC4Q5GLZ8 1057 aaPredicted RBP17.8■□□□□ 0.44
USP42-201ENST00000306177 PALD1Q9ULE6 856 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 ARFGAP2Q8N6H7 521 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 WDR17Q8IZU2 1322 aa17.8■□□□□ 0.44
USP42-201ENST00000306177 USP17L12C9JPN9 530 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 USP17L21D6R901 530 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 EVCP57679 992 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 GRM1Q13255 1194 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 ASIC2Q16515 512 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.79■□□□□ 0.44
USP42-201ENST00000306177 NAP1L3Q99457 506 aaPredicted RBP17.79■□□□□ 0.44
USP42-201ENST00000306177 SSX2IPQ9Y2D8 614 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP42-201ENST00000306177 TCP10Q12799 353 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 ADALQ6DHV7 355 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 hCG_1642624A0A1W2PR95 340 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 PFKFB2O60825 505 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 ATP2C2O75185 946 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 CCDC26Q8TAB7 109 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 ZSCAN10Q96SZ4 725 aaPredicted RBP17.79■□□□□ 0.44
USP42-201ENST00000306177 GREM2Q9H772 168 aa17.79■□□□□ 0.44
USP42-201ENST00000306177 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
USP42-201ENST00000306177 BCAMP50895 628 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 MFSD14BQ5SR56 506 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 TMTC1Q8IUR5 882 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 SELENOSQ9BQE4 189 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.78■□□□□ 0.44
USP42-201ENST00000306177 CAPN2P17655 700 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 ZBED4O75132 1171 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
USP42-201ENST00000306177 ATP2A2P16615 1042 aaKnown RBP17.78■□□□□ 0.44
USP42-201ENST00000306177 STRN3Q13033 797 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 DYMQ7RTS9 669 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 HDXQ7Z353 690 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 STX10O60499 249 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 USH1GQ495M9 461 aa17.78■□□□□ 0.44
USP42-201ENST00000306177 PRAMEF22A3QJZ6 481 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 ANKS4BQ8N8V4 417 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 FBF1Q8TES7 1133 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 NELFBQ8WX92 580 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 CCDC114Q96M63 670 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP42-201ENST00000306177 TAB2Q9NYJ8 693 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 ARHGAP6O43182 974 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 CRKLP46109 303 aaKnown RBP17.77■□□□□ 0.44
USP42-201ENST00000306177 GTF2IP78347 998 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 SLC9C1Q4G0N8 1177 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 CFAP58Q5T655 872 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 VPS18Q9P253 973 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 IQGAP3Q86VI3 1631 aa17.77■□□□□ 0.44
USP42-201ENST00000306177 SPOPO43791 374 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms