RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 KDM4AO75164 1064 aa32.08■■■□□ 2.73
HDAC3-201ENST00000305264 GDF11O95390 407 aa32.08■■■□□ 2.73
HDAC3-201ENST00000305264 AKR1B1P15121 316 aa32.08■■■□□ 2.73
HDAC3-201ENST00000305264 CERKLQ49MI3 558 aaPredicted RBP32.08■■■□□ 2.73
HDAC3-201ENST00000305264 NEK1Q96PY6 1258 aa32.08■■■□□ 2.73
HDAC3-201ENST00000305264 GREB1LQ9C091 1923 aaPredicted RBP32.08■■■□□ 2.73
HDAC3-201ENST00000305264 USP2O75604 605 aaPredicted RBP32.08■■■□□ 2.73
HDAC3-201ENST00000305264 MB21D2Q8IYB1 491 aaPredicted RBP32.08■■■□□ 2.73
HDAC3-201ENST00000305264 WRNIP1Q96S55 665 aa32.08■■■□□ 2.73
HDAC3-201ENST00000305264 CPA1P15085 419 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 JAG1P78504 1218 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 MOB2Q70IA6 237 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 ZNF444Q8N0Y2 327 aaPredicted RBP32.07■■■□□ 2.72
HDAC3-201ENST00000305264 ESR2Q92731 530 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 KLRG1Q96E93 195 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 DOCK1Q14185 1865 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 PASKQ96RG2 1323 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 PPP1R12BO60237 982 aaPredicted RBP32.07■■■□□ 2.72
HDAC3-201ENST00000305264 CELF2O95319 508 aaKnown RBP32.07■■■□□ 2.72
HDAC3-201ENST00000305264 CASTP20810 708 aaKnown RBP32.07■■■□□ 2.72
HDAC3-201ENST00000305264 INPP5BP32019 993 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 ZNF112Q9UJU3 913 aa32.07■■■□□ 2.72
HDAC3-201ENST00000305264 CYB5R4Q7L1T6 521 aa32.06■■■□□ 2.72
HDAC3-201ENST00000305264 ANGEL1Q9UNK9 670 aaKnown RBP32.06■■■□□ 2.72
HDAC3-201ENST00000305264 TSPY2A6NKD2 308 aa32.05■■■□□ 2.72
HDAC3-201ENST00000305264 TFAP4Q01664 338 aa32.05■■■□□ 2.72
HDAC3-201ENST00000305264 TTLL12Q14166 644 aaPredicted RBP32.05■■■□□ 2.72
HDAC3-201ENST00000305264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.05■■■□□ 2.723e-6■■■□□ 15.8
HDAC3-201ENST00000305264 ZSWIM5Q9P217 1185 aa32.05■■■□□ 2.72
HDAC3-201ENST00000305264 CHST3Q7LGC8 479 aa32.05■■■□□ 2.72
HDAC3-201ENST00000305264 UPF3BQ9BZI7 483 aaKnown RBP32.05■■■□□ 2.72
HDAC3-201ENST00000305264 TSPY3P0CV98 308 aa32.04■■■□□ 2.72
HDAC3-201ENST00000305264 TSPY8P0CW00 308 aa32.04■■■□□ 2.72
HDAC3-201ENST00000305264 CAP2P40123 477 aa32.04■■■□□ 2.72
HDAC3-201ENST00000305264 ANTXR2P58335 489 aa32.04■■■□□ 2.72
HDAC3-201ENST00000305264 MPHOSPH10O00566 681 aaKnown RBP32.03■■■□□ 2.72
HDAC3-201ENST00000305264 PSMA5P28066 241 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 ABCB5Q2M3G0 1257 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 CST9Q5W186 159 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 ZKSCAN4Q969J2 545 aaPredicted RBP32.03■■■□□ 2.72
HDAC3-201ENST00000305264 CCDC17Q96LX7 622 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.03■■■□□ 2.72
HDAC3-201ENST00000305264 TM6SF1Q9BZW5 370 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.03■■■□□ 2.72
HDAC3-201ENST00000305264 PLIN4Q96Q06 1357 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 GH2P01242 217 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 TCEANC2Q96MN5 208 aa32.03■■■□□ 2.72
HDAC3-201ENST00000305264 IREB2P48200 963 aaKnown RBP32.02■■■□□ 2.72
HDAC3-201ENST00000305264 BLOC1S2Q6QNY1 142 aa32.02■■■□□ 2.72
HDAC3-201ENST00000305264 ZSWIM6Q9HCJ5 1215 aa32.02■■■□□ 2.72
HDAC3-201ENST00000305264 NMT2O60551 498 aa32.01■■■□□ 2.72
HDAC3-201ENST00000305264 CTNND1O60716 968 aaKnown RBP32.01■■■□□ 2.72
HDAC3-201ENST00000305264 MAP3K11Q16584 847 aa32.01■■■□□ 2.72
HDAC3-201ENST00000305264 NEDD1Q8NHV4 660 aa32.01■■■□□ 2.72
HDAC3-201ENST00000305264 ZKSCAN3Q9BRR0 538 aa32.01■■■□□ 2.72
HDAC3-201ENST00000305264 GBA2Q9HCG7 927 aaPredicted RBP32.01■■■□□ 2.72
HDAC3-201ENST00000305264 ZBTB21Q9ULJ3 1066 aa32.01■■■□□ 2.72
HDAC3-201ENST00000305264 CLEC10AQ8IUN9 316 aa32.01■■■□□ 2.71
HDAC3-201ENST00000305264 HMGB1P09429 215 aaKnown RBP32■■■□□ 2.71
HDAC3-201ENST00000305264 GUCY1A2P33402 732 aa32■■■□□ 2.71
HDAC3-201ENST00000305264 MCM5P33992 734 aa32■■■□□ 2.71
HDAC3-201ENST00000305264 PPP1R3FQ6ZSY5 799 aaPredicted RBP32■■■□□ 2.71
HDAC3-201ENST00000305264 ARMC9Q7Z3E5 817 aa32■■■□□ 2.71
HDAC3-201ENST00000305264 PRC1O43663 620 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 RPS6KB1P23443 525 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 NT5C2P49902 561 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 FSTL1Q12841 308 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 RUFY3Q7L099 469 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 DHX32Q7L7V1 743 aaKnown RBP31.99■■■□□ 2.71
HDAC3-201ENST00000305264 LRRC2Q9BYS8 371 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 IL17RBQ9NRM6 502 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 VGLL4Q14135 290 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 TMEM179Q6ZVK1 233 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 CYP46A1Q9Y6A2 500 aa31.99■■■□□ 2.71
HDAC3-201ENST00000305264 UBE2Q2LH0YL09 131 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 MAP3K9P80192 1104 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 EXOSC10Q01780 885 aaKnown RBP31.98■■■□□ 2.71
HDAC3-201ENST00000305264 SEPT2Q15019 361 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 SCYL3Q8IZE3 742 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 CABP5Q9NP86 173 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 IGKV6D-41A0A0C4DH26 115 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 RAB3GAP1Q15042 981 aa31.98■■■□□ 2.71
HDAC3-201ENST00000305264 FKBP1BP68106 108 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 NOL9Q5SY16 702 aaKnown RBP31.97■■■□□ 2.71
HDAC3-201ENST00000305264 CCDC84Q86UT8 332 aaPredicted RBP31.97■■■□□ 2.71
HDAC3-201ENST00000305264 IQCA1Q86XH1 822 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 C2orf69Q8N8R5 385 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 CEP95Q96GE4 821 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 CLMNQ96JQ2 1002 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 SNCAIPQ9Y6H5 919 aa31.97■■■□□ 2.71
HDAC3-201ENST00000305264 ASNSP08243 561 aa31.96■■■□□ 2.71
HDAC3-201ENST00000305264 ZSCAN10Q96SZ4 725 aaPredicted RBP31.96■■■□□ 2.71
HDAC3-201ENST00000305264 UBAC1Q9BSL1 405 aa31.96■■■□□ 2.71
HDAC3-201ENST00000305264 GPHNQ9NQX3 736 aaPredicted RBP31.96■■■□□ 2.71
HDAC3-201ENST00000305264 TNKSO95271 1327 aa31.96■■■□□ 2.71
HDAC3-201ENST00000305264 ANKRD13AQ8IZ07 590 aa31.96■■■□□ 2.71
HDAC3-201ENST00000305264 PHIPQ8WWQ0 1821 aa31.95■■■□□ 2.71
HDAC3-201ENST00000305264 LDLRAD1Q5T700 205 aa31.95■■■□□ 2.71
HDAC3-201ENST00000305264 TCP11L1Q9NUJ3 509 aa31.95■■■□□ 2.71
HDAC3-201ENST00000305264 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms