RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PZPP20742 1482 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 TROVE2P10155 538 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 U2AF2P26368 475 aaKnown RBP eCLIP8.48□□□□□ -1.055e-8■■□□□ 12
SF3B3-201ENST00000302516 SDCCAG8Q86SQ7 713 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 PUM3Q15397 648 aaKnown RBP8.48□□□□□ -1.05
SF3B3-201ENST00000302516 KIFC2Q96AC6 838 aa8.48□□□□□ -1.05
SF3B3-201ENST00000302516 CCNT1O60563 726 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 MAN1A1P33908 653 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 POLR2DO15514 142 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 SGSM2O43147 1006 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 N4BP1O75113 896 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 KRT5P13647 590 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 PEX26Q7Z412 305 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 CCDC89Q8N998 374 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 PPP4R1Q8TF05 950 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 BICC1Q9H694 974 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 TFCP2Q12800 502 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 NELFBQ8WX92 580 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 KLHL14Q9P2G3 628 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 RGS16O15492 202 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 MUM1Q2TAK8 710 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 NT5C3AQ9H0P0 336 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 TTC38Q5R3I4 469 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 MCTP2Q6DN12 878 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 RFC4P35249 363 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 PDE4DQ08499 809 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 EIF4A2Q14240 407 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 ZNF354CQ86Y25 554 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
SF3B3-201ENST00000302516 IDI1Q13907 227 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 TCEANC2Q96MN5 208 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 MAST3O60307 1309 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 PHLPP2Q6ZVD8 1323 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 SNCBQ16143 134 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 COPS6Q7L5N1 327 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 HAUS8Q9BT25 410 aa8.47□□□□□ -1.05
SF3B3-201ENST00000302516 GIPC1O14908 333 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 HIP1RO75146 1068 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 RNASELQ05823 741 aaKnown RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 DMTNQ08495 405 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 TTLL12Q14166 644 aaPredicted RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 LMBR1LQ6UX01 489 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 BBOF1Q8ND07 529 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 RABGGTAQ92696 567 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 CAPS2Q9BXY5 557 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 EIF3CLB5ME19 914 aaKnown RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 ZBTB17Q13105 803 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 GBP7Q8N8V2 638 aaPredicted RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 EIF3CQ99613 913 aaKnown RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 RRAGDQ9NQL2 400 aaPredicted RBP8.46□□□□□ -1.05
SF3B3-201ENST00000302516 TMOD4Q9NZQ9 345 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 ASIC3Q9UHC3 531 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 ATP6V1AP38606 617 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 NBPF14Q5TI25 921 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 DCAF5Q96JK2 942 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 FNBP1Q96RU3 617 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 CARD6Q9BX69 1037 aa8.46□□□□□ -1.05
SF3B3-201ENST00000302516 EFCAB13Q8IY85 973 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 NLRP3Q96P20 1036 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 DSCC1Q9BVC3 393 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 BCL2L12Q9HB09 334 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-201ENST00000302516 RLBP1P12271 317 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 UAP1Q16222 522 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-201ENST00000302516 SNX14Q9Y5W7 946 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 ADALQ6DHV7 355 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 OGFOD1Q8N543 542 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 IWS1Q96ST2 819 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 NFE2L3Q9Y4A8 694 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 HYOU1Q9Y4L1 999 aa8.46□□□□□ -1.06
SF3B3-201ENST00000302516 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 ZCRB1Q8TBF4 217 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 ATP10BO94823 1461 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 PTPRKQ15262 1439 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 CTNNA1P35221 906 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 SEPT14Q6ZU15 432 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 AMFRQ9UKV5 643 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 HSP90AA5PQ58FG0 334 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 PSMD1Q99460 953 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 BZW2Q9Y6E2 419 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.45□□□□□ -1.062e-14■□□□□ 11.1
SF3B3-201ENST00000302516 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 BRD1O95696 1058 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 KIF11P52732 1056 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 RBM6P78332 1123 aaKnown RBP8.45□□□□□ -1.06
SF3B3-201ENST00000302516 TNNI3KQ59H18 835 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 ANKRD20A3Q5VUR7 823 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 GALNT17Q6IS24 598 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC105Q8IYK2 499 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 APPBP2Q92624 585 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
SF3B3-201ENST00000302516 FPGT-TNNI3KV9GXZ4 949 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms