RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 B4E1Z4 1266 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 RNF225M0QZC1 329 aaPredicted RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 ADORA1P30542 326 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 FBXW10Q5XX13 1052 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 WDR93Q6P2C0 686 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 NOSTRINQ8IVI9 506 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 KAT2BQ92831 832 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 VPS16Q9H269 839 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 KAT14Q9H8E8 782 aa14.75□□□□□ -0.05
TVP23A-201ENST00000299866 FBXO2Q9UK22 296 aaPredicted RBP14.75□□□□□ -0.05
TVP23A-201ENST00000299866 GPAA1O43292 621 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 ZBTB43O43298 467 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 TUBBP07437 444 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 ERCC5P28715 1186 aaPredicted RBP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 TOB1P50616 345 aaPredicted RBP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 USP14P54578 494 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 MMS19Q96T76 1030 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 INCENPQ9NQS7 918 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 PCDHB6Q9Y5E3 794 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 N4BP3O15049 544 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 IL15P40933 162 aaPredicted RBP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 TMTC1Q8IUR5 882 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 TEX2Q8IWB9 1127 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 DIS3L2Q8IYB7 885 aaKnown RBP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 STAMQ92783 540 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 PTPREP23469 700 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 FOXO4P98177 505 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 SCARF1Q14162 830 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 SAFBQ15424 915 aaKnown RBP eCLIP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 MAP9Q49MG5 647 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 NT5DC1Q5TFE4 455 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 FAM76AQ8TAV0 307 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
TVP23A-201ENST00000299866 FAM169AQ9Y6X4 670 aa14.74□□□□□ -0.05
TVP23A-201ENST00000299866 UBN2Q6ZU65 1347 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 EBAG9O00559 213 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CPP00450 1065 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 GUCY1A2P33402 732 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 ZAP70P43403 619 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 AMPD2Q01433 879 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 TBC1D10CQ8IV04 446 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 SUGP1Q8IWZ8 645 aaKnown RBP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CSRNP2Q9H175 543 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 SH2B2O14492 632 aaPredicted RBP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 ACTN4O43707 911 aaKnown RBP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 PBX1P40424 430 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 AARSP49588 968 aaKnown RBP eCLIP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 SSRP1Q08945 709 aaKnown RBP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 NR5A1Q13285 461 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CCDC91Q7Z6B0 441 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 TRIML1Q8N9V2 468 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CHP1Q99653 195 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 EYA2O00167 538 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CMTR1Q8N1G2 835 aaKnown RBP14.73□□□□□ -0.05
TVP23A-201ENST00000299866 COG1Q8WTW3 980 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 VIPAS39Q9H9C1 493 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
TVP23A-201ENST00000299866 CPDO75976 1380 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 GOLGA6CA6NDK9 693 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 GOLGA6DP0CG33 693 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 KRT9P35527 623 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 CYP26C1Q6V0L0 522 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 CAGE1Q8TC20 777 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 APPBP2Q92624 585 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 ABHD10Q9NUJ1 306 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 GOLGA6AQ9NYA3 693 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 SAMM50Q9Y512 469 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 DIP2AQ14689 1571 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 ATP1A1P05023 1023 aaKnown RBP14.72□□□□□ -0.05
TVP23A-201ENST00000299866 IRAK1P51617 712 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 CASP7P55210 303 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
TVP23A-201ENST00000299866 BCAS4Q8TDM0 211 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 SECISBP2LQ93073 1101 aaKnown RBP14.72□□□□□ -0.05
TVP23A-201ENST00000299866 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 TAB2Q9NYJ8 693 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 CTNND2Q9UQB3 1225 aa14.72□□□□□ -0.05
TVP23A-201ENST00000299866 MYBL2P10244 700 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 CTAGE1Q96RT6 745 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 FAM107BQ9H098 131 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
TVP23A-201ENST00000299866 CEBPAP49715 358 aaPredicted RBP14.71□□□□□ -0.05
TVP23A-201ENST00000299866 NTRK3Q16288 839 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 KANK3Q6NY19 840 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
TVP23A-201ENST00000299866 PES1O00541 588 aaKnown RBP14.71□□□□□ -0.06
TVP23A-201ENST00000299866 CCDC51Q96ER9 411 aa14.71□□□□□ -0.06
TVP23A-201ENST00000299866 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.06
TVP23A-201ENST00000299866 GPR108Q9NPR9 543 aa14.71□□□□□ -0.06
TVP23A-201ENST00000299866 ELOA2Q8IYF1 753 aaPredicted RBP14.7□□□□□ -0.06
TVP23A-201ENST00000299866 TTC5Q8N0Z6 440 aa14.7□□□□□ -0.06
TVP23A-201ENST00000299866 XAGE2Q96GT9 111 aa14.7□□□□□ -0.06
TVP23A-201ENST00000299866 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
TVP23A-201ENST00000299866 FAM217BQ9NTX9 383 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms