RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 NWD2Q9ULI1 1742 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
FOXN4-201ENST00000299162 AFMP43652 599 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 IQCB1Q15051 598 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
FOXN4-201ENST00000299162 LONRF3Q496Y0 759 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
FOXN4-201ENST00000299162 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
FOXN4-201ENST00000299162 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 GNAT2P19087 354 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
FOXN4-201ENST00000299162 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 KLHL10Q6JEL2 608 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
FOXN4-201ENST00000299162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CTAGE5O15320 804 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 POLR2DO15514 142 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 YEATS4O95619 227 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 GTF2F1P35269 517 aaKnown RBP eCLIP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 SLC39A14Q15043 492 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 ZNF174Q15697 407 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 ELF2Q15723 593 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 AXDND1Q5T1B0 1012 aaPredicted RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 RASGRP2Q7LDG7 609 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CATIPQ7Z7H3 387 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 NOSTRINQ8IVI9 506 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 DHX40Q8IX18 779 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TDRD7Q8NHU6 1098 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 STAG1Q8WVM7 1258 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 NARFQ9UHQ1 456 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 COL14A1Q05707 1796 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 RAD21O60216 631 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TMC6Q7Z403 805 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TRMT44Q8IYL2 757 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 ZSCAN10Q96SZ4 725 aaPredicted RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 RIOK1Q9BRS2 568 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TMX1Q9H3N1 280 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 EARS2Q5JPH6 523 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
FOXN4-201ENST00000299162 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
FOXN4-201ENST00000299162 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 CDC25AP30304 524 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 LIFRP42702 1097 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 SGMS1Q86VZ5 419 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 RASGRP4Q8TDF6 673 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 NSUN4Q96CB9 384 aaKnown RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 KCNH3Q9ULD8 1083 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 GOLGA8HP0CJ92 632 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 RBM43Q6ZSC3 357 aaKnown RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 JMYQ8N9B5 988 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
FOXN4-201ENST00000299162 DHX58Q96C10 678 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 SPTLC3Q9NUV7 552 aa11.57□□□□□ -0.56
FOXN4-201ENST00000299162 USP17L3A6NCW0 530 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 USP17L4A6NCW7 530 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 SERPINC1P01008 464 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 IFNAR1P17181 557 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 FAM193AP78312 1265 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 ALX1Q15699 326 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 USP17L1Q7RTZ2 530 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 CRNKL1Q9BZJ0 848 aaKnown RBP11.56□□□□□ -0.56
FOXN4-201ENST00000299162 XPO4Q9C0E2 1151 aaKnown RBP11.56□□□□□ -0.56
FOXN4-201ENST00000299162 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 USP27XA6NNY8 438 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 MMP1P03956 469 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 TOB1P50616 345 aaPredicted RBP11.56□□□□□ -0.56
FOXN4-201ENST00000299162 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 DCP1AQ9NPI6 582 aaPredicted RBP11.56□□□□□ -0.56
FOXN4-201ENST00000299162 WNT7AO00755 349 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 UFL1O94874 794 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 TRIM37O94972 964 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 SKILP12757 684 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 CMA1P23946 247 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 STX17P56962 302 aa11.56□□□□□ -0.56
FOXN4-201ENST00000299162 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms